RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PI4K2BG5E9Z4 385 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ABLIM1O14639 778 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 DKC1O60832 514 aaKnown RBP eCLIP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PDE5AO76074 875 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CYP11B2P19099 503 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PSMC4P43686 418 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PPATQ06203 517 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CBX3Q13185 183 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 PPP2R5EQ16537 467 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CBWD6Q4V339 395 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CBWD3Q5JTY5 395 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 CBWD5Q5RIA9 395 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C6orf163Q5TEZ5 329 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 IYDQ6PHW0 289 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RBM44Q6ZP01 1051 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RIPOR1Q6ZS17 1223 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 TRIM67Q6ZTA4 783 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SLC35C1Q96A29 364 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 HSPBAP1Q96EW2 488 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 RILPQ96NA2 401 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 ECSITQ9BQ95 431 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 GRIP2Q9C0E4 1043 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 KCTD10Q9H3F6 313 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 C10orf88Q9H8K7 445 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 SIX2Q9NPC8 291 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 LARSQ9P2J5 1176 aaKnown RBP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 APPL1Q9UKG1 709 aa7.97□□□□□ -1.13
HDAC9-214ENST00000441542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.97□□□□□ -1.13
HDAC9-214ENST00000441542 FAM237BA0A1B0GVD1 139 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ANPEPP15144 967 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ALDH18A1P54886 795 aaKnown RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 CDC16Q13042 620 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 NR1H3Q13133 447 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 TTLL12Q14166 644 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 KNOP1Q1ED39 458 aaKnown RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 RBM12BQ8IXT5 1001 aaKnown RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ZBED8Q8IZ13 594 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 MYCT1Q8N699 235 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 SREK1Q8WXA9 508 aaKnown RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 SNF8Q96H20 258 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 REEP2Q9BRK0 252 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 BRIP1Q9BX63 1249 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 TMEM120AQ9BXJ8 343 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 RSPH9Q9H1X1 276 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF395Q9H8N7 513 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 LIN28AQ9H9Z2 209 aaKnown RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 KIAA1586Q9HCI6 787 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 SLC17A7Q9P2U7 560 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ANGPTL2Q9UKU9 493 aa7.96□□□□□ -1.13
HDAC9-214ENST00000441542 ARIH1Q9Y4X5 557 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-214ENST00000441542 C1orf167Q5SNV9 1468 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 ABCB11O95342 1321 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 MED24O75448 989 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 SORBS2O94875 1100 aaKnown RBP7.96□□□□□ -1.14
HDAC9-214ENST00000441542 STAMBPO95630 424 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 ASMTLO95671 621 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 GAS8O95995 478 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 MYL2P10916 166 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 NELFEP18615 380 aaKnown RBP7.96□□□□□ -1.14
HDAC9-214ENST00000441542 GRIA2P42262 883 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 MAGEA4P43358 317 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 ADARP55265 1226 aaKnown RBP7.96□□□□□ -1.14
HDAC9-214ENST00000441542 OCRLQ01968 901 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 MOGSQ13724 837 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 NCOA4Q13772 614 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 MMEL1Q495T6 779 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 POU5F2Q8N7G0 328 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 GSTCDQ8NEC7 633 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 ZNF564Q8TBZ8 553 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-214ENST00000441542 GCNAQ96QF7 691 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 SENP7Q9BQF6 1050 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 HERPUD2Q9BSE4 406 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 LRRC27Q9C0I9 530 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 INTS2Q9H0H0 1204 aaKnown RBP7.96□□□□□ -1.14
HDAC9-214ENST00000441542 BHMT2Q9H2M3 363 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 STARD13Q9Y3M8 1113 aa7.96□□□□□ -1.14
HDAC9-214ENST00000441542 BTNL10A8MVZ5 291 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 CALUO43852 315 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-214ENST00000441542 GCLMP48507 274 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 CDK7P50613 346 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 MED21Q13503 144 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 R3HDM1Q15032 1099 aaKnown RBP7.95□□□□□ -1.14
HDAC9-214ENST00000441542 TRIP10Q15642 601 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 PABPC1LQ4VXU2 614 aaKnown RBP7.95□□□□□ -1.14
HDAC9-214ENST00000441542 PRR16Q569H4 304 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 PPM1KQ8N3J5 372 aa7.95□□□□□ -1.14
HDAC9-214ENST00000441542 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
HDAC9-214ENST00000441542 RSPH1Q8WYR4 309 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms