RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 MAF1Q9H063 256 aa6.9□□□□□ -1.3
CHD6-204ENST00000440647 UPF3AQ9H1J1 476 aaKnown RBP6.9□□□□□ -1.3
CHD6-204ENST00000440647 TTYH1Q9H313 450 aaPredicted RBP6.9□□□□□ -1.3
CHD6-204ENST00000440647 A1CFQ9NQ94 594 aaKnown RBP6.9□□□□□ -1.3
CHD6-204ENST00000440647 CCPG1Q9ULG6 757 aa6.9□□□□□ -1.3
CHD6-204ENST00000440647 R3HCC1Q9Y3T6 440 aaKnown RBP6.9□□□□□ -1.3
CHD6-204ENST00000440647 NCANO14594 1321 aa6.9□□□□□ -1.3
CHD6-204ENST00000440647 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 RFXAPO00287 272 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 ADCY6O43306 1168 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 SUSD5O60279 629 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 CSF2RAP15509 400 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 TACR1P25103 407 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 CDR1P51861 262 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 EPHB3P54753 998 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 RBM10P98175 930 aaKnown RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 FSCN1Q16658 493 aaKnown RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 NSMFQ6X4W1 530 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 TMEM151BQ8IW70 566 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 FAM126BQ8IXS8 530 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 FAM133AQ8N9E0 248 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 MZB1Q8WU39 189 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 DCAF4Q8WV16 495 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 TIFAQ96CG3 184 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 EVI5LQ96CN4 794 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 SIGLEC10Q96LC7 697 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 LGR4Q9BXB1 951 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 NKX2-4Q9H2Z4 354 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 GPRC5CQ9NQ84 441 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
CHD6-204ENST00000440647 TBX21Q9UL17 535 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 GBF1Q92538 1859 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 LCTP09848 1927 aa6.89□□□□□ -1.31
CHD6-204ENST00000440647 ZNF536O15090 1300 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 C7orf72A4D263 438 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 NPHS1O60500 1241 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 NMT2O60551 498 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 PLA2G6O60733 806 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 PPP1R11O60927 126 aaPredicted RBP6.88□□□□□ -1.31
CHD6-204ENST00000440647 GJB6O95452 261 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ICAM1P05362 532 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ITGAVP06756 1048 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 PLS3P13797 630 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 HOXC12P31275 282 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 CDK7P50613 346 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 SNAP25P60880 206 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ITGA7Q13683 1181 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 RAB30Q15771 203 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
CHD6-204ENST00000440647 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ANKRD45Q5TZF3 282 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 MRM1Q6IN84 353 aaKnown RBP6.88□□□□□ -1.31
CHD6-204ENST00000440647 CXCL17Q6UXB2 119 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 FBXO16Q8IX29 292 aaPredicted RBP6.88□□□□□ -1.31
CHD6-204ENST00000440647 LZTR1Q8N653 840 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 OTUD7AQ8TE49 926 aaPredicted RBP6.88□□□□□ -1.31
CHD6-204ENST00000440647 SEZ6LQ9BYH1 1024 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 KRTAP4-2Q9BYR5 136 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 HIPK3Q9H422 1215 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 VTA1Q9NP79 307 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 CYP39A1Q9NYL5 469 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 MSRAQ9UJ68 235 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD6-204ENST00000440647 IRAK3Q9Y616 596 aa6.88□□□□□ -1.31
CHD6-204ENST00000440647 FRMPD2Q68DX3 1309 aaPredicted RBP6.87□□□□□ -1.31
CHD6-204ENST00000440647 RAD50Q92878 1312 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 ORC4O43929 436 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 THBDP07204 575 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 GLI4P10075 376 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 TOP1P11387 765 aaKnown RBP6.87□□□□□ -1.31
CHD6-204ENST00000440647 CYP2C18P33260 490 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 SLC16A2P36021 539 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 CPT1AP50416 773 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 SSPNQ14714 243 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 BRDTQ58F21 947 aaPredicted RBP6.87□□□□□ -1.31
CHD6-204ENST00000440647 MUM1L1Q5H9M0 696 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 RNF187Q5TA31 235 aaPredicted RBP6.87□□□□□ -1.31
CHD6-204ENST00000440647 VPS53Q5VIR6 699 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 SYDE2Q5VT97 1194 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 TCERG1LQ5VWI1 586 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 IQSEC1Q6DN90 963 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 RASGRP2Q7LDG7 609 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 ZNF227Q86WZ6 799 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
CHD6-204ENST00000440647 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms