RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NFE2Q16621 373 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 CT47A1Q5JQC4 288 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 SPATA31D4Q6ZUB0 917 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 MCM10Q7L590 875 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 TAS1R1Q7RTX1 841 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 CXorf67Q86X51 503 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ELOA2Q8IYF1 753 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 NXPE1Q8N323 547 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZNF276Q8N554 614 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 DCLRE1CQ96SD1 692 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 CDC5LQ99459 802 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 CPPED1Q9BRF8 314 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ASPSCR1Q9BZE9 553 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 H2AFY2Q9P0M6 372 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 C11orf21Q9P2W6 132 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 EIF2B4Q9UI10 523 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 USP18Q9UMW8 372 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 APOBEC2Q9Y235 224 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 NOC2LQ9Y3T9 749 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 XDHP47989 1333 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 FLT4P35916 1363 aa4.15□□□□□ -1.74
HMGB3P11-201ENST00000440127 KIF24Q5T7B8 1368 aa4.15□□□□□ -1.74
HMGB3P11-201ENST00000440127 KIAA0232Q92628 1395 aa4.15□□□□□ -1.74
HMGB3P11-201ENST00000440127 ITSN1Q15811 1721 aa4.15□□□□□ -1.74
HMGB3P11-201ENST00000440127 KLRG2A4D1S0 409 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 B5MCH6 92 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 DIRC3C9JPN6 131 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 HOXA3O43365 443 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZEB2O60315 1214 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 FKBP9O95302 570 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 LY86O95711 162 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ITGB1P05556 798 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 LTA4HP09960 611 aaKnown RBP4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 CPEP16870 476 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 RABGGTBP53611 331 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 EPHB1P54762 984 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 SESN3P58005 492 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 MCL1Q07820 350 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 MGAT5Q09328 741 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 DHCR24Q15392 516 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 MTHFSDQ2M296 383 aaKnown RBP4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ATP13A4Q4VNC1 1196 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 KCNV1Q6PIU1 500 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 LHFPL2Q6ZUX7 228 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 FKBP9P1Q75LS8 142 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 CHD1LQ86WJ1 897 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ULK2Q8IYT8 1036 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC5A5Q92911 643 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 GCC1Q96CN9 775 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ACAP3Q96P50 834 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 FZD1Q9UP38 647 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 MAP2P11137 1827 aaKnown RBP4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 TOPAZ1Q8N9V7 1692 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 ABCC4O15439 1325 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 USP19O94966 1318 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 IGSF1Q8N6C5 1336 aa4.15□□□□□ -1.75
HMGB3P11-201ENST00000440127 NRKQ7Z2Y5 1582 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 A0A0A6YYK5 440 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 LOC102724159A0A0B4J2E5 919 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 GAGE12BA1L429 117 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 GAGE12HA6NDE8 117 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PLSCR1O15162 318 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TPD52L2O43399 206 aaKnown RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TSPAN6O43657 245 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PRAMEF4O60810 478 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PHF2O75151 1096 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 KATNA1O75449 491 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 ABHD16AO95870 558 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 GASTP01350 101 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 HLA-DOAP06340 250 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 LAG3P18627 525 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 HOXC9P31274 260 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TAP1Q03518 808 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 FAPQ12884 760 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 MRPL49Q13405 166 aaKnown RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PWP2Q15269 919 aaKnown RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 SEPT7Q16181 437 aaKnown RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TIGD2Q4W5G0 525 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 ANKRD45Q5TZF3 282 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 UNQ6494/PRO21346Q6UXR6 183 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 LRRC55Q6ZSA7 311 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 NECAB2Q7Z6G3 386 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 RASSF3Q86WH2 238 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 RPAP2Q8IXW5 612 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 ATL2Q8NHH9 583 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 CPT1CQ8TCG5 803 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PGBD4Q96DM1 585 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 RAX2Q96IS3 184 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TTC1Q99614 292 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 SOX7Q9BT81 388 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC46A2Q9BY10 475 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 MTFR1LQ9H019 292 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 BABAM1Q9NWV8 329 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 GEMIN8Q9NWZ8 242 aaKnown RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 ING3Q9NXR8 418 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 TCEAL9Q9UHQ7 104 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZBTB21Q9ULJ3 1066 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 PTPRCP08575 1304 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 FER1L4A9Z1Z3 1794 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms