RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 USP37Q86T82 979 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 SYCP3Q8IZU3 236 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 LINC00301Q8NCQ3 95 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 MYADMQ96S97 322 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 TSPAN18Q96SJ8 248 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 FIZ1Q96SL8 496 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 ST6GALNAC4Q9H4F1 302 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 EPS15L1Q9UBC2 864 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 AGO2Q9UKV8 859 aaKnown RBP21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 PCDHB8Q9UN66 801 aa21.57■■□□□ 1.04
SHROOM1-204ENST00000440118 N4BP1O75113 896 aaKnown RBP21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 YEATS4O95619 227 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 ZSCAN22P10073 491 aaPredicted RBP21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 CPB1P15086 417 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 CYP3A5P20815 502 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 RFX1P22670 979 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 ACOT2P49753 483 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 TMEM132DQ14C87 1099 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 UVSSAQ2YD98 709 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 JADE1Q6IE81 842 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 ZNF720Q7Z2F6 126 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 ACCSQ96QU6 501 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 LRRC27Q9C0I9 530 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 FBXL5Q9UKA1 691 aa21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 CPSF3Q9UKF6 684 aaKnown RBP21.56■■□□□ 1.04
SHROOM1-204ENST00000440118 TISP43B9A030 160 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 ANKRD63C9JTQ0 380 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 FAM189A1O60320 539 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PPP6R2O75170 966 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PAPLNO95428 1278 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PDGFBP01127 241 aaPredicted RBP21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 LRPAP1P30533 357 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 GUCY2FP51841 1108 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 NTHL1P78549 312 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 YWHAHQ04917 246 aaPredicted RBP21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 POSTNQ15063 836 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PABPC1LQ4VXU2 614 aaKnown RBP21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 SLC8B1Q6J4K2 584 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 RTL10Q7L3V2 364 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 CCDC65Q8IXS2 484 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 ZNF461Q8TAF7 563 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 NOC3LQ8WTT2 800 aaKnown RBP21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PRRX2Q99811 253 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 CYP4F11Q9HBI6 524 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PANK4Q9NVE7 773 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 DUSP12Q9UNI6 340 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 PCDHB13Q9Y5F0 798 aa21.55■■□□□ 1.04
SHROOM1-204ENST00000440118 A0A087X0B3 334 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 WDR27A2RRH5 827 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 F13A1P00488 732 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 NFICP08651 508 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 LAMP2P13473 410 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 ALCAMQ13740 583 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 STXBP4Q6ZWJ1 553 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 RSAD2Q8WXG1 361 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 NXPE3Q969Y0 559 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 DHX58Q96C10 678 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 DNAJC19Q96DA6 116 aa21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 ZFP37Q9Y6Q3 630 aaPredicted RBP21.54■■□□□ 1.04
SHROOM1-204ENST00000440118 CUTAO60888 179 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 ME1P48163 572 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 VCPP55072 806 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 L1TD1Q5T7N2 865 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 ELMOD1Q8N336 334 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 TMEM130Q8N3G9 435 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 KCNG4Q8TDN1 519 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 TNMDQ9H2S6 317 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 ASB7Q9H672 318 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 OLFML3Q9NRN5 406 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 CDH7Q9ULB5 785 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 DERAQ9Y315 318 aa21.53■■□□□ 1.04
SHROOM1-204ENST00000440118 TSC2P49815 1807 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 ARHGEF37A1IGU5 675 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 POU2F2P09086 479 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 ODC1P11926 461 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 AMPD3Q01432 767 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 ZBTB6Q15916 424 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 SPATA1Q5VX52 437 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 TPGS2Q68CL5 300 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 IQUBQ8NA54 791 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 FLCNQ8NFG4 579 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 CUEDC2Q9H467 287 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 HCFC1R1Q9NWW0 138 aa21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 MRPS23Q9Y3D9 190 aaKnown RBP21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 TIMM13Q9Y5L4 95 aaPredicted RBP21.52■■□□□ 1.04
SHROOM1-204ENST00000440118 SCN1AP35498 2009 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 M0QZQ0 153 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 NARSO43776 548 aaKnown RBP21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 PPP1R37O75864 691 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 IL18RAPO95256 599 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 CFHP08603 1231 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 ATF2P15336 505 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 AVPR2P30518 371 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 ASIC1P78348 528 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 ADCY1Q08828 1119 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 MRPL58Q14197 206 aaKnown RBP21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 MTSS1LQ765P7 747 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 ST13P5Q8NFI4 369 aaPredicted RBP21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 ING5Q8WYH8 240 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 FGF13Q92913 245 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms