RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 USTQ9Y2C2 406 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 PURAQ00577 322 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 AMPD2Q01433 879 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 CDR2Q01850 454 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 ZCCHC17Q9NP64 241 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 CISHQ9NSE2 258 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 CNOT8Q9UFF9 292 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 PIK3R2O00459 728 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 GNAT1P11488 350 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SCP2P22307 547 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SLC7A5Q01650 507 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SGSM1Q2NKQ1 1148 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 NUP85Q9BW27 656 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SYNCQ9H7C4 482 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 ANO9A1A5B4 782 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 DUSP11O75319 330 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 GJB6O95452 261 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 CHRNB2P17787 502 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 GPC5P78333 572 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SURF1Q15526 300 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 SLC10A6Q3KNW5 377 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 AP1M1Q9BXS5 423 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 PARD6BQ9BYG5 372 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
CPSF7-205ENST00000439958 AMFRQ9UKV5 643 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 COL1A2P08123 1366 aa16.11■□□□□ 0.17
CPSF7-205ENST00000439958 ASGR1P07306 291 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 THPOP40225 353 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 ENOSF1Q7L5Y1 443 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 C1orf127Q8N9H9 656 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 USP6NLQ92738 828 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-205ENST00000439958 MCF2P10911 925 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 TBXAS1P24557 533 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-205ENST00000439958 DAB2IPQ5VWQ8 1189 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 PAPD7Q5XG87 772 aaKnown RBP16.1■□□□□ 0.17
CPSF7-205ENST00000439958 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 PTPRHQ9HD43 1115 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 ABLIM1O14639 778 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 FAM189A1O60320 539 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 RTN2O75298 545 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 TNNC1P63316 161 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 SNX17Q15036 470 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 KCNA10Q16322 511 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 TMCO3Q6UWJ1 677 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 HPDLQ96IR7 371 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 SNX9Q9Y5X1 595 aa16.1■□□□□ 0.17
CPSF7-205ENST00000439958 ASS1P00966 412 aaKnown RBP16.09■□□□□ 0.17
CPSF7-205ENST00000439958 TMEM253P0C7T8 217 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
CPSF7-205ENST00000439958 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 ZNF410Q86VK4 478 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 C18orf25Q96B23 403 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-205ENST00000439958 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-205ENST00000439958 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 RECQL4O94761 1208 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 BPIFB4P59827 614 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 ZNF564Q8TBZ8 553 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-205ENST00000439958 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 CACNG4Q9UBN1 327 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 COG5Q9UP83 839 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 TRPM7Q96QT4 1865 aa16.09■□□□□ 0.17
CPSF7-205ENST00000439958 GOLGA8SH3BPF8 625 aa16.08■□□□□ 0.17
CPSF7-205ENST00000439958 ZC3H11AO75152 810 aaKnown RBP eCLIP16.08■□□□□ 0.179e-7■■■□□ 16.7
CPSF7-205ENST00000439958 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.17
CPSF7-205ENST00000439958 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.17
CPSF7-205ENST00000439958 TRIM7Q9C029 511 aa16.08■□□□□ 0.17
CPSF7-205ENST00000439958 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.17
CPSF7-205ENST00000439958 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-205ENST00000439958 SEPT4O43236 478 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 IL18RAPO95256 599 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 RRM1P23921 792 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 ZNF662Q6ZS27 426 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 GSPT2Q8IYD1 628 aaKnown RBP16.08■□□□□ 0.16
CPSF7-205ENST00000439958 HEXIM2Q96MH2 286 aaKnown RBP16.08■□□□□ 0.16
CPSF7-205ENST00000439958 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 A0A1B0GUA9 196 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 PROZP22891 400 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 GDF6Q6KF10 455 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-205ENST00000439958 C1orf131Q8NDD1 294 aaKnown RBP16.08■□□□□ 0.16
CPSF7-205ENST00000439958 CDY2AQ9Y6F7 541 aa16.08■□□□□ 0.16
CPSF7-205ENST00000439958 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
CPSF7-205ENST00000439958 KIF4AO95239 1232 aa16.07■□□□□ 0.16
CPSF7-205ENST00000439958 CYBAP13498 195 aa16.07■□□□□ 0.16
CPSF7-205ENST00000439958 YY1P25490 414 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms