RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 MAP3K6O95382 1288 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 LCA5LO95447 670 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 CTNNA2P26232 953 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 EIF3BP55884 814 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 IGBP1P78318 339 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 KDSRQ06136 332 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 TAF1BQ53T94 588 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 CIAPIN1Q6FI81 312 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMEM270Q6UE05 265 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZDHHC24Q6UX98 284 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 NOP9Q86U38 636 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZDHHC14Q8IZN3 488 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 SYTL5Q8TDW5 730 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 LRRN4Q8WUT4 740 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZBTB45Q96K62 511 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMEM117Q9H0C3 514 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
CDC42SE1-202ENST00000439374 O00370 1275 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 CETPP11597 493 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 KRT10P13645 584 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 KCNA3P22001 575 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 CCND1P24385 295 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 RXRBP28702 533 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PTDSS1P48651 473 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 FAM160B2Q86V87 743 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 DNAJC9Q8WXX5 260 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 TTC17Q96AE7 1141 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMEM206Q9H813 350 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 FBXO6Q9NRD1 293 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PIK3R2O00459 728 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 USP1O94782 785 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 SNUPNO95149 360 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PLS3P13797 630 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 FOXN2P32314 431 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 NOVP48745 357 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PAPOLAP51003 745 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 MFAP3P55082 362 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 ORC1Q13415 861 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 ARMC9Q7Z3E5 817 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PCDHB18PQ96TA0 734 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 C1orf112Q9NSG2 853 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZNF148Q9UQR1 794 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 MYH1P12882 1939 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 CAPN9O14815 690 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 TNFRSF8P28908 595 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 CIITAP33076 1130 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 MMP13P45452 471 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 NPTX2P47972 431 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 PTENP60484 403 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 STRN3Q13033 797 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZNF662Q6ZS27 426 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 DEPTORQ8TB45 409 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 ERLEC1Q96DZ1 483 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 FAM161BQ96MY7 647 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 SMC6Q96SB8 1091 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 NXF1Q9UBU9 619 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 NAALADL1Q9UQQ1 740 aa10.53□□□□□ -0.72
CDC42SE1-202ENST00000439374 NR3C2P08235 984 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 CETN2P41208 172 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 SCNN1BP51168 640 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC15A2Q16348 729 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 DUPD1Q68J44 220 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 MOXD1Q6UVY6 613 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 CLPTM1LQ96KA5 538 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 PHF12Q96QT6 1004 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 TBC1D10AQ9BXI6 508 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 STMN4Q9H169 189 aaPredicted RBP10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 SAE1Q9UBE0 346 aaPredicted RBP10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.72
CDC42SE1-202ENST00000439374 ARHGAP42A6NI28 874 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 WDR64B1ANS9 1081 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 SMNDC1O75940 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 AGTP01019 485 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 CHRNB2P17787 502 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 GM2AP17900 193 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 RASSF2P50749 326 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 MGAT5Q09328 741 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 FASTKD3Q14CZ7 662 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 KIFAP3Q92845 792 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 DEFB129Q9H1M3 183 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 EPB41L4BQ9H329 900 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 SYNCQ9H7C4 482 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 MYOZ2Q9NPC6 264 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 SUCLA2Q9P2R7 463 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms