RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 LRRC31Q6UY01 552 aa12.99□□□□□ -0.33
TCOF1-205ENST00000439160 IL31RAQ8NI17 732 aa12.99□□□□□ -0.33
TCOF1-205ENST00000439160 ACSF2Q96CM8 615 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-205ENST00000439160 CDCA5Q96FF9 252 aa12.99□□□□□ -0.33
TCOF1-205ENST00000439160 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-205ENST00000439160 KLRC4O43908 158 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 GPC4O75487 556 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 INSRRP14616 1297 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 CDR2Q01850 454 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 C9orf72Q96LT7 481 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 TGFB3P10600 412 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 ITGA4P13612 1032 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 BRAFP15056 766 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 XPAP23025 273 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-205ENST00000439160 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 ASPHQ12797 758 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 MOB2Q70IA6 237 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 RSRC1Q96IZ7 334 aaKnown RBP12.98□□□□□ -0.33
TCOF1-205ENST00000439160 FIS1Q9Y3D6 152 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 FRMPD4Q14CM0 1322 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 ZBBXA8MT70 800 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PHF2O75151 1096 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 CD4P01730 458 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 OAZ1P54368 228 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 SLC47A2Q86VL8 602 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 MYLK4Q86YV6 388 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PPP1R12CQ9BZL4 782 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PSMD10O75832 226 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 CPT1AP50416 773 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PIGHQ14442 188 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-205ENST00000439160 LRRC14Q15048 493 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 ACAD10Q6JQN1 1059 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 JAMLQ86YT9 394 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 SYNPO2Q9UMS6 1093 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 KCNH4Q9UQ05 1017 aa12.98□□□□□ -0.33
TCOF1-205ENST00000439160 PPP1R11O60927 126 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 ITGB5P18084 799 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 STILQ15468 1287 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 FEZF2Q8TBJ5 459 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 ATP8B4Q8TF62 1192 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TATDN2Q93075 761 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 MYL6P60660 151 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 CDK17Q00537 523 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 FSD1LQ9BXM9 530 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 G3BP2Q9UN86 482 aaKnown RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 COPEO14579 308 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 GRIK1P39086 918 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TSTA3Q13630 321 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 P3H1Q32P28 736 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 ZNF677Q86XU0 584 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 CYFIP2Q96F07 1278 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 ATP6V1G3Q96LB4 118 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 SPON2Q9BUD6 331 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 SETD4Q9NVD3 440 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 H3BRJ5 948 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 APOL1O14791 398 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 KCNN4O15554 427 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 CST8O60676 142 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 UPP2O95045 317 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 STAG3L1P0CL83 205 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 RRM1P23921 792 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 PMLP29590 882 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 MAP2K2P36507 400 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 EPM2AIP1Q7L775 607 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-205ENST00000439160 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 KLHL29Q96CT2 875 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
TCOF1-205ENST00000439160 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms