RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZMYND12Q9H0C1 365 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 VPS11Q9H270 941 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 PDE11AQ9HCR9 933 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 IFNA8P32881 189 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 TEKT4Q8WW24 435 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 WDR91A4D1P6 747 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 TLL1O43897 1013 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 PALMO75781 387 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 ANP32DO95626 131 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 ATP1A2P50993 1020 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
NEK1-201ENST00000439128 PRKCQQ04759 706 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 MPZL3Q6UWV2 235 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 SLC30A10Q6XR72 485 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 CATSPER3Q86XQ3 398 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 TINF2Q9BSI4 451 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 TRPV2Q9Y5S1 764 aa12.76□□□□□ -0.37
NEK1-201ENST00000439128 F5H5T6 163 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 TAF2Q6P1X5 1199 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 PLA2G4CQ9UP65 541 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 NUMBP49757 651 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 NDUFV1P49821 464 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 PGM5Q15124 567 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 VSTM4Q8IW00 320 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 C10orf67Q8IYJ2 551 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 SLC30A5Q8TAD4 765 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 RPRD1AQ96P16 312 aaPredicted RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 CINPQ9BW66 212 aaPredicted RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 CASS4Q9NQ75 786 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 TBX20Q9UMR3 447 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 MYO1DO94832 1006 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 RASSF2P50749 326 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 WASHC5Q12768 1159 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 APBA2Q99767 749 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 GPR63Q9BZJ6 419 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 MIF4GDA9UHW6 222 aaKnown RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 RPA1P27694 616 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 ELNP15502 786 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 CYP11B2P19099 503 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 FKBP1AP62942 108 aaKnown RBP12.75□□□□□ -0.37
NEK1-201ENST00000439128 BRD3Q15059 726 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 EFHC1Q5JVL4 640 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 CD302Q8IX05 232 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 GOLPH3LQ9H4A5 285 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
NEK1-201ENST00000439128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 C3orf70A6NLC5 250 aaPredicted RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 A6NNZ2 444 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 NAMPTP43490 491 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 DHX9Q08211 1270 aaKnown RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 E2F5Q15329 346 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 TUBB8Q3ZCM7 444 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 FIBCD1Q8N539 461 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 PPP1R13LQ8WUF5 828 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 NFKBIZQ9BYH8 718 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 STK38LQ9Y2H1 464 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 HSPA4LO95757 839 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 SHMT1P34896 483 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 ZNF211Q13398 564 aaPredicted RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 ORC1Q13415 861 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 MFSD4BQ5TF39 518 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 MMS22LQ6ZRQ5 1243 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 LZICQ8WZA0 190 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
NEK1-201ENST00000439128 SLC28A3Q9HAS3 691 aa12.74□□□□□ -0.37
NEK1-201ENST00000439128 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms