RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 STX17P56962 302 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 NLRP12P59046 1061 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 FKBP3Q00688 224 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 ELAVL2Q12926 359 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 PTPN14Q15678 1187 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 PDE12Q6L8Q7 609 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 TTI2Q6NXR4 508 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 TAS1R1Q7RTX1 841 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 ADGRD2Q7Z7M1 963 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 C1orf127Q8N9H9 656 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 MLKLQ8NB16 471 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 MKNK1Q9BUB5 465 aa18.28■□□□□ 0.52
TARDBP-203ENST00000439080 NGRNQ9NPE2 291 aaKnown RBP18.28■□□□□ 0.52
TARDBP-203ENST00000439080 ANO9A1A5B4 782 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 LRRIQ3A6PVS8 624 aaPredicted RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 HIDE1A8MVS5 230 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 PIRO00625 290 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 SLC16A3O15427 465 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 TNNC2P02585 160 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 EPB41P11171 864 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 BMS1Q14692 1282 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 USP41Q3LFD5 358 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 TCEAL5Q5H9L2 206 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 FAM171A1Q5VUB5 890 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 FOXR2Q6PJQ5 311 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 INTS8Q75QN2 995 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 MAFAQ8NHW3 353 aaPredicted RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 PARD3BQ8TEW8 1205 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 SYAP1Q96A49 352 aaPredicted RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 ZNF560Q96MR9 790 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 DUSP9Q99956 384 aaKnown RBP18.27■□□□□ 0.51
TARDBP-203ENST00000439080 ITGA11Q9UKX5 1188 aa18.27■□□□□ 0.51
TARDBP-203ENST00000439080 C2CD2LO14523 706 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 TRAPPC3O43617 180 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 DLG4P78352 724 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 DSG1Q02413 1049 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 BFSP1Q12934 665 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 CCDC85BQ15834 202 aaPredicted RBP18.26■□□□□ 0.51
TARDBP-203ENST00000439080 DUOXA2Q1HG44 320 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 RTP2Q5QGT7 225 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 KIAA1841Q6NSI8 718 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
TARDBP-203ENST00000439080 PPP2R3CQ969Q6 453 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 MRPL17Q9NRX2 175 aaKnown RBP18.26■□□□□ 0.51
TARDBP-203ENST00000439080 CHST7Q9NS84 486 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 DACH1Q9UI36 760 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 SIX4Q9UIU6 781 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 RWDD2AQ9UIY3 292 aa18.26■□□□□ 0.51
TARDBP-203ENST00000439080 C2orf71A6NGG8 1288 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 KRT19P08727 400 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 TRIM49P0CI25 452 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 TRIM49CP0CI26 452 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 KRT13P13646 458 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 TKTP29401 623 aaKnown RBP18.25■□□□□ 0.51
TARDBP-203ENST00000439080 AARSP49588 968 aaKnown RBP eCLIP18.25■□□□□ 0.51
TARDBP-203ENST00000439080 VAMP7P51809 220 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 CLDN10P78369 228 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 USP37Q86T82 979 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 CEP57Q86XR8 500 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 CSGALNACT2Q8N6G5 542 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
TARDBP-203ENST00000439080 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 TMC2Q8TDI7 906 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 PPM1EQ8WY54 764 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 SUSD3Q96L08 255 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 CEP63Q96MT8 703 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 TTPALQ9BTX7 342 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 AGAP1Q9UPQ3 857 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 IRAK3Q9Y616 596 aa18.25■□□□□ 0.51
TARDBP-203ENST00000439080 SPTLC1O15269 473 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 CXCL14O95715 111 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 FGFR3P22607 806 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 NRIP1P48552 1158 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 TAF6P49848 677 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 LILRA4P59901 499 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 SV2CQ496J9 727 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 KIAA0319Q5VV43 1072 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 SCARA3Q6AZY7 606 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 SASS6Q6UVJ0 657 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 TRAPPC11Q7Z392 1133 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 RBM23Q86U06 439 aaKnown RBP18.24■□□□□ 0.51
TARDBP-203ENST00000439080 RIN2Q8WYP3 895 aaPredicted RBP18.24■□□□□ 0.51
TARDBP-203ENST00000439080 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 SSX2IPQ9Y2D8 614 aa18.24■□□□□ 0.51
TARDBP-203ENST00000439080 UNC80Q8N2C7 3258 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 SYN3O14994 580 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 LILRB3O75022 631 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 PNPLA4P41247 253 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 AP3M2P53677 418 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 RBP5P82980 135 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 ENPEPQ07075 957 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 HYAL1Q12794 435 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 PSMD5Q16401 504 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 STX1AQ16623 288 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 DUSP6Q16828 381 aa18.23■□□□□ 0.51
TARDBP-203ENST00000439080 C1orf220Q5T0J3 134 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms