RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PNOCQ13519 176 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 MRPL58Q14197 206 aaKnown RBP14.4□□□□□ -0.1
LINC00399-201ENST00000439008 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
LINC00399-201ENST00000439008 TMEM132DQ14C87 1099 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 PUS10Q3MIT2 529 aaKnown RBP14.4□□□□□ -0.1
LINC00399-201ENST00000439008 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 TMC5Q6UXY8 1006 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
LINC00399-201ENST00000439008 SUSD3Q96L08 255 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 KCTD10Q9H3F6 313 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 ASB7Q9H672 318 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 HSPBP1Q9NZL4 362 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 TIMM13Q9Y5L4 95 aaPredicted RBP14.4□□□□□ -0.1
LINC00399-201ENST00000439008 DENND4AQ7Z401 1863 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 PIRO00625 290 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 ADH1AP07327 375 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 POU5F1Q01860 360 aaKnown RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 ELAVL2Q12926 359 aaKnown RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 VARS2Q5ST30 1063 aaKnown RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 CD302Q8IX05 232 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 GPD1LQ8N335 351 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 PLEKHO2Q8TD55 490 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 NOC3LQ8WTT2 800 aaKnown RBP14.39□□□□□ -0.11
LINC00399-201ENST00000439008 BORCS6Q96GS4 357 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 ADAM7Q9H2U9 754 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 POMKQ9H5K3 350 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 EXOC1Q9NV70 894 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 MTRRQ9UBK8 725 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 DERAQ9Y315 318 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 C2CD2Q9Y426 696 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 NOTCH4Q99466 2003 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 UBE4BO95155 1302 aa14.39□□□□□ -0.11
LINC00399-201ENST00000439008 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 M0QZQ0 153 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 RHOBTB3O94955 611 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 GLUD1P00367 558 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 MCM4P33991 863 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 OR1D2P34982 312 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 CYP2J2P51589 502 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 LILRA4P59901 499 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 STXBP4Q6ZWJ1 553 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 PPFIBP1Q86W92 1011 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 ADHFE1Q8IWW8 467 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 C1orf127Q8N9H9 656 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 TMEM87AQ8NBN3 555 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 RDH13Q8NBN7 331 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 BEST2Q8NFU1 509 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 OR5B17Q8NGF7 314 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 ZNF707Q96C28 371 aaPredicted RBP14.38□□□□□ -0.11
LINC00399-201ENST00000439008 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC00399-201ENST00000439008 DPP3Q9NY33 737 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 RBAKQ9NYW8 714 aaPredicted RBP14.38□□□□□ -0.11
LINC00399-201ENST00000439008 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 SIX4Q9UIU6 781 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 MAPK8IP1Q9UQF2 711 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 NUB1Q9Y5A7 615 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 CDY1Q9Y6F8 540 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 MYO10Q9HD67 2058 aa14.38□□□□□ -0.11
LINC00399-201ENST00000439008 DOCK8Q8NF50 2099 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 IL18RAPO95256 599 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 PAPLNO95428 1278 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 VNN2O95498 520 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
LINC00399-201ENST00000439008 MYL1P05976 194 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 FAM160A1Q05DH4 1040 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 PSMD2Q13200 908 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 RAB33AQ14088 237 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 CBX2Q14781 532 aaPredicted RBP14.37□□□□□ -0.11
LINC00399-201ENST00000439008 SMYD4Q8IYR2 804 aaPredicted RBP14.37□□□□□ -0.11
LINC00399-201ENST00000439008 KREMEN2Q8NCW0 462 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 POP1Q99575 1024 aaKnown RBP14.37□□□□□ -0.11
LINC00399-201ENST00000439008 DZANK1Q9NVP4 752 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 FBXW11Q9UKB1 542 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 PCDHB8Q9UN66 801 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
LINC00399-201ENST00000439008 WDR27A2RRH5 827 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 LOC730098B7Z3J9 87 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SYN3O14994 580 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SP100P23497 879 aaPredicted RBP14.36□□□□□ -0.11
LINC00399-201ENST00000439008 ANP32AP39687 249 aaKnown RBP14.36□□□□□ -0.11
LINC00399-201ENST00000439008 CASP4P49662 377 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
LINC00399-201ENST00000439008 ROR1Q01973 937 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SNRNP35Q16560 246 aaKnown RBP14.36□□□□□ -0.11
LINC00399-201ENST00000439008 SLC8B1Q6J4K2 584 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 ANKS3Q6ZW76 656 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 GPR149Q86SP6 731 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 C12orf56Q8IXR9 622 aa14.36□□□□□ -0.11
LINC00399-201ENST00000439008 GJD3Q8N144 294 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms