RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DISP2A7MBM2 1401 aa4.09□□□□□ -1.75
HMGB1P18-201ENST00000438801 TNS1Q9HBL0 1735 aaKnown RBP4.09□□□□□ -1.76
HMGB1P18-201ENST00000438801 NEMP1O14524 444 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ADGRB2O60241 1585 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 MAST3O60307 1309 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ULK1O75385 1050 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 A2MP01023 1474 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ELANEP08246 267 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 MYCLP1P12525 358 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 VCANP13611 3396 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZNF37AP17032 561 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ENPP1P22413 925 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 MPLP40238 635 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 SESN3P58005 492 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 CAMSAP2Q08AD1 1489 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 MPP3Q13368 585 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 DHCR24Q15392 516 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 SPDYE7PQ495Y7 208 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZKSCAN2Q63HK3 967 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 TSHZ3Q63HK5 1081 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 PNPLA7Q6ZV29 1317 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 Q6ZVL8 140 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 HECW1Q76N89 1606 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 HDGFL2Q7Z4V5 671 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 GPR149Q86SP6 731 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 JAZF1Q86VZ6 243 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 TRMT2AQ8IZ69 625 aaKnown RBP4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 SLC44A3Q8N4M1 653 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 CLRN3Q8NCR9 226 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 GPR156Q8NFN8 814 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 OR7D4Q8NG98 312 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 SLC9A6Q92581 669 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 P2RX7Q99572 595 aaKnown RBP4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 IFT22Q9H7X7 185 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 BCO1Q9HAY6 547 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 KLHL11Q9NVR0 708 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 CNTLNQ9NXG0 1405 aa4.08□□□□□ -1.76
HMGB1P18-201ENST00000438801 RREB1Q92766 1687 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 A2ML1A8K2U0 1454 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 ATRNL1Q5VV63 1379 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZEB2O60315 1214 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 ALOX15P16050 662 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 ID4P47928 161 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 PTH2RP49190 550 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 RAP2BP61225 183 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 SCAPQ12770 1279 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 SP140Q13342 867 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 RRP12Q5JTH9 1297 aaKnown RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 MED25Q71SY5 747 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 TMEM132CQ8N3T6 1108 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 BOLLQ8N9W6 283 aaKnown RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 FAM98AQ8NCA5 519 aaKnown RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 FBXO18Q8NFZ0 1043 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 CAGE1Q8TC20 777 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 TSPEARQ8WU66 669 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 NELL1Q92832 810 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 CAMKK2Q96RR4 588 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 TTC1Q99614 292 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 ALOXE3Q9BYJ1 711 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 REXO4Q9GZR2 422 aaKnown RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 TESQ9UGI8 421 aaKnown RBP4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 NOX1Q9Y5S8 564 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 CASZ1Q86V15 1759 aa4.07□□□□□ -1.76
HMGB1P18-201ENST00000438801 TET3O43151 1660 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 MAP3K1Q13233 1512 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 PARD3Q8TEW0 1356 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 WNT10BO00744 389 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 HSPA8P11142 646 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 FDXRP22570 491 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 ECHS1P30084 290 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 ELLP55199 621 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 CCT2P78371 535 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 MRPS9P82933 396 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 GJC2Q5T442 439 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 B3GNTL1Q67FW5 361 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 FAM180AQ6UWF9 173 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 DDX46Q7L014 1031 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 DRC7Q8IY82 874 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 AUTS2Q8WXX7 1259 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 FUBP3Q96I24 572 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 Q96MF0 132 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 UHRF1Q96T88 793 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZSWIM1Q9BR11 485 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 MRI1Q9BV20 369 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 ALG13Q9NP73 1137 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 TLK1Q9UKI8 766 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 APOBEC2Q9Y235 224 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 LAMB4A4D0S4 1761 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 ARHGEF28Q8N1W1 1705 aaKnown RBP4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 MROH2AA6NES4 1674 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 DEPDC5O75140 1603 aa4.06□□□□□ -1.76
HMGB1P18-201ENST00000438801 EHBP1L1Q8N3D4 1523 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 TTC28Q96AY4 2481 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 MSH6P52701 1360 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 SALL3Q9BXA9 1300 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 POMCP01189 267 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 RAP2AP10114 183 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 IL2RBP14784 551 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms