RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZC3H15Q8WU90 426 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 PARVAQ9NVD7 372 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ANKRD63C9JTQ0 380 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MAP4K3Q8IVH8 894 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MORC4Q8TE76 937 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 COPS5Q92905 334 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ELMO3Q96BJ8 720 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ARL8AQ96BM9 186 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MLXIPLQ9NP71 852 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 TAF1P21675 1872 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 A0A087WZ62 844 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 TGFB1I1O43294 461 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 TJP3O95049 919 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCNE2O96020 404 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZNF286BP0CG31 522 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 KCNMA1Q12791 1236 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 ANO5Q75V66 913 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 TSEN2Q8NCE0 465 aaKnown RBP12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 FDXACB1Q9BRP7 624 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 IP6K2Q9UHH9 426 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 INTUQ9ULD6 942 aa12.27□□□□□ -0.44
TRAPPC9-202ENST00000438773 IL18RAPO95256 599 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 COMTP21964 271 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF131P52739 623 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 HIBCHQ6NVY1 386 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTC39CQ8N584 583 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 SEPT10Q9P0V9 454 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 SPATA31C2B4DYI2 1134 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 MMEP08473 750 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 GTF2H1P32780 548 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 ARL4AP40617 200 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 BASP1P80723 227 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 CUL2Q13617 745 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 C2CD6Q53TS8 623 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 MPZL3Q6UWV2 235 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 REPS2Q8NFH8 660 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLC20A1Q8WUM9 679 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 ARHGEF2Q92974 986 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 C18orf8Q96DM3 657 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 NOVA2Q9UNW9 492 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 COMMD10Q9Y6G5 202 aa12.27□□□□□ -0.45
TRAPPC9-202ENST00000438773 ADCY3O60266 1144 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 CYP11B1P15538 503 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ALS2CLQ60I27 953 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 SPOPLQ6IQ16 392 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 DARS2Q6PI48 645 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■■■□□ 18.4
TRAPPC9-202ENST00000438773 TATDN2Q93075 761 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZSCAN5CA6NGD5 496 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 KRT3P12035 628 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 CDR2Q01850 454 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 PPP3CAQ08209 521 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCDC137Q6PK04 289 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 PDZD4Q76G19 769 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 C1orf54Q8WWF1 131 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 LENG9Q96B70 501 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 LRFN2Q9ULH4 789 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 CNTNAP1P78357 1384 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 POC1B-GALNT4F8VUJ3 575 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 PIK3R2O00459 728 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 KRT14P02533 472 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ITGB3P05106 788 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ADORA2BP29275 332 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 GTF2BQ00403 316 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 P3H4Q92791 437 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 MBOAT7Q96N66 472 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 ASNSD1Q9NWL6 643 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 GGT7Q9UJ14 662 aa12.26□□□□□ -0.45
TRAPPC9-202ENST00000438773 TARSL2A2RTX5 802 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 PI4K2BG5E9Z4 385 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SDC4P31431 198 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 CHRNA3P32297 505 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ADCYAP1R1P41586 468 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ARPP19P56211 112 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 DLG4P78352 724 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLC47A2Q86VL8 602 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms