RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 TP53BP2Q13625 1128 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 ABCB5Q2M3G0 1257 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 HECTD2Q5U5R9 776 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 FAM43AQ8N2R8 423 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 Q8NA96 180 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 NUP133Q8WUM0 1156 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 COA7Q96BR5 231 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 MRGPRX4Q96LA9 322 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 DMRTA2Q96SC8 542 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC13A1Q9BZW2 595 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 GSTO2Q9H4Y5 243 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 SYNPO2LQ9H987 977 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 G3BP2Q9UN86 482 aaKnown RBP4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 LIMCH1Q9UPQ0 1083 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 TNKSO95271 1327 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 KIF21BO75037 1637 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 GRIN2AQ12879 1464 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 CDKL5O76039 1030 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 HSPA1LP34931 641 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 CDC42EP1Q00587 391 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 EXOSC10Q01780 885 aaKnown RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 FSTL1Q12841 308 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 FOXI1Q12951 378 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 PCBP2Q15366 365 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 CLUL1Q15846 466 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 PLEKHG6Q3KR16 790 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 RHOT1Q8IXI2 618 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 FITM2Q8N6M3 262 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 DCBLD1Q8N8Z6 715 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 BEND2Q8NDZ0 799 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 NLGN4YQ8NFZ3 816 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 IFI44Q8TCB0 444 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 ASB10Q8WXI3 467 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 HDAC10Q969S8 669 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 NACC2Q96BF6 587 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 PHACTR3Q96KR7 559 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 ASPSCR1Q9BZE9 553 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 REXO4Q9GZR2 422 aaKnown RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 RNPEPQ9H4A4 650 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 CYP4F11Q9HBI6 524 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 SAP30BPQ9UHR5 308 aaKnown RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 SPEF1Q9Y4P9 236 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 PCDHA13Q9Y5I0 950 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 TTBK1Q5TCY1 1321 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 ADCY10Q96PN6 1610 aa4.38□□□□□ -1.71
HMGB3P12-201ENST00000438745 IQSEC2Q5JU85 1478 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 S100BP04271 92 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 HKR1P10072 659 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 ALAS1P13196 640 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 FGFR4P22455 802 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC6A4P31645 630 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 MPLP40238 635 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 SEC24CP53992 1094 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 USP14P54578 494 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 NOMO3P69849 1222 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 ODF1Q14990 250 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 CYP2A13Q16696 494 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 NOMO2Q5JPE7 1267 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 OLFML1Q6UWY5 402 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 UBE3BQ7Z3V4 1068 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 GPR149Q86SP6 731 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 LCORLQ8N3X6 602 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 TEKT5Q96M29 485 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 C11orf54Q9H0W9 315 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 KCNE5Q9UJ90 142 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 PCDHB1Q9Y5F3 818 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 MAST3O60307 1309 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 NUP160Q12769 1436 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 YEATS2Q9ULM3 1422 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 PLB1Q6P1J6 1458 aa4.37□□□□□ -1.71
HMGB3P12-201ENST00000438745 WIZO95785 1651 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 PPRC1Q5VV67 1664 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 UNC119BA6NIH7 251 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ALDH1L1O75891 902 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ESRRBO95718 433 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 TYRP1P17643 537 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 AVPR1BP47901 424 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC16A1P53985 500 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ADKP55263 362 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 CXADRP78310 365 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLFN5Q08AF3 891 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 PTPN21Q16825 1174 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 C3orf36Q3SXR2 165 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ODR4Q5SWX8 454 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 RAVER1Q8IY67 606 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 MARS2Q96GW9 593 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 MED15Q96RN5 788 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 PNKPQ96T60 521 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZSWIM1Q9BR11 485 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 ALOXE3Q9BYJ1 711 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 GALNT9Q9HCQ5 603 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms