RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DNAJB4Q9UDY4 337 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 LINC01553A4QN01 128 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 GRXCR1A8MXD5 290 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 TRAPPC3O43617 180 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 SERPINC1P01008 464 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 RB1P06400 928 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 TPM3P06753 285 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 KRT19P08727 400 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 POLR2BP30876 1174 aaKnown RBP19.82■□□□□ 0.76
HDAC6-208ENST00000438518 PIK3CAP42336 1068 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 TAF6P49848 677 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 RABGGTBP53611 331 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 ELAVL2Q12926 359 aaKnown RBP19.82■□□□□ 0.76
HDAC6-208ENST00000438518 NCOA4Q13772 614 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 UVSSAQ2YD98 709 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 SV2CQ496J9 727 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 CBWD6Q4V339 395 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 CBWD3Q5JTY5 395 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 CBWD5Q5RIA9 395 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 FKBP15Q5T1M5 1219 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 APTXQ7Z2E3 356 aaKnown RBP19.82■□□□□ 0.76
HDAC6-208ENST00000438518 GAS2L3Q86XJ1 694 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 COLGALT1Q8NBJ5 622 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 RBSNQ9H1K0 784 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 MMRN2Q9H8L6 949 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 GOLGA2P5Q9HBQ8 144 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 RAB20Q9NX57 234 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 TAB2Q9NYJ8 693 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 SIX4Q9UIU6 781 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 AGAP1Q9UPQ3 857 aa19.82■□□□□ 0.76
HDAC6-208ENST00000438518 LGALS16A8MUM7 142 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 C5orf67F2Z3F1 127 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 B4GALT3O60512 393 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 B3GAT3O94766 335 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 CA3P07451 260 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 LINC00271P0C7V0 271 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 SLC11A1P49279 550 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 SMYD5Q6GMV2 418 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 GBP6Q6ZN66 633 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 TGS1Q96RS0 853 aaKnown RBP19.81■□□□□ 0.76
HDAC6-208ENST00000438518 VPS16Q9H269 839 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 ADAM28Q9UKQ2 775 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 NUB1Q9Y5A7 615 aa19.81■□□□□ 0.76
HDAC6-208ENST00000438518 TMEM265A0A087WTH1 108 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 A0A1B0GTH6 734 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 LCHNA4D1U4 455 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 PES1O00541 588 aaKnown RBP19.8■□□□□ 0.76
HDAC6-208ENST00000438518 HLA-DRAP01903 254 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 P4HA1P13674 534 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 AARSP49588 968 aaKnown RBP eCLIP19.8■□□□□ 0.76
HDAC6-208ENST00000438518 FANCCQ00597 558 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 PLCB3Q01970 1234 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 EPC2Q52LR7 807 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 SARM1Q6SZW1 724 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 SLC39A11Q8N1S5 342 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 TAS1R2Q8TE23 839 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 TMEM169Q96HH4 297 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 FAM81BQ96LP2 452 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 FAM124BQ9H5Z6 455 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-208ENST00000438518 SLC28A3Q9HAS3 691 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 SPG21Q9NZD8 308 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 COLQQ9Y215 455 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-208ENST00000438518 YBX2Q9Y2T7 364 aaKnown RBP19.8■□□□□ 0.76
HDAC6-208ENST00000438518 DAAM1Q9Y4D1 1078 aa19.8■□□□□ 0.76
HDAC6-208ENST00000438518 SF3B1O75533 1304 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 CBFA2T2O43439 604 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 TADA2AO75478 443 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 KIF4AO95239 1232 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 VNN1O95497 513 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 ASS1P00966 412 aaKnown RBP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 CST3P01034 146 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 DNAJB2P25686 324 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 BMPR1AP36894 532 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 GUCY2FP51841 1108 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 LILRA4P59901 499 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 ERVK-21P61565 698 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 EXOC3L4Q17RC7 722 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 ZNF699Q32M78 642 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 WDR44Q5JSH3 913 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 DPH6Q7L8W6 267 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 IGSF21Q96ID5 467 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 HPDLQ96IR7 371 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 PAAF1Q9BRP4 392 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 C11orf84Q9BUA3 381 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 RTN4Q9NQC3 1192 aaKnown RBP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 MARCH5Q9NX47 278 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 GDAP2Q9NXN4 497 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 HCSTQ9UBK5 93 aa19.79■□□□□ 0.76
HDAC6-208ENST00000438518 PRG3Q9Y2Y8 225 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-208ENST00000438518 KPNA7A9QM74 516 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 FAM163BP0C2L3 166 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 CTNNB1P35222 781 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 UBASH3AP57075 661 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 TAP1Q03518 808 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 KRT17Q04695 432 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 UBE3AQ05086 875 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 PPP2R2DQ66LE6 453 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 EHBP1Q8NDI1 1231 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 C3orf58Q8NDZ4 430 aa19.78■□□□□ 0.76
HDAC6-208ENST00000438518 SPATA18Q8TC71 538 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms