RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MATR3P43243 847 aaKnown RBP eCLIP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 CENPCQ03188 943 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 UBXN1Q04323 297 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 PPP3CAQ08209 521 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 NCBP1Q09161 790 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 BFSP1Q12934 665 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 NFX1Q12986 1120 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 PSMD6Q15008 389 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 LRRC26Q2I0M4 334 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 C11orf91Q3C1V1 193 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 FILIP1LQ4L180 1135 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 DCAF17Q5H9S7 520 aaPredicted RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 SLC27A1Q6PCB7 646 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 INTS8Q75QN2 995 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 LRRC8DQ7L1W4 858 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 UBE2Q1Q7Z7E8 422 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 VSTM4Q8IW00 320 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 THNSL1Q8IYQ7 743 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 CEP120Q8N960 986 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 KDF1Q8NAX2 398 aaPredicted RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 CAGE1Q8TC20 777 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 PARD3BQ8TEW8 1205 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 CCDC127Q96BQ5 260 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 POP1Q99575 1024 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 EIF2AQ9BY44 585 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 TMX1Q9H3N1 280 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 PADI3Q9ULW8 664 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 PIN4Q9Y237 131 aaKnown RBP7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 SQORQ9Y6N5 450 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
LSM3P3-201ENST00000436601 LOXHD1Q8IVV2 1947 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 PTPRJQ12913 1337 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 UMODL1Q5DID0 1318 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 MROH7Q68CQ1 1323 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 LRRIQ3A6PVS8 624 aaPredicted RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 DCDC2CA8MYV0 355 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 SCAMP3O14828 347 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 GPR182O15218 404 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 TLR3O15455 904 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 MGEA5O60502 916 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 NBNO60934 754 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 NPTXRO95502 500 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 AFPP02771 609 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 TPM2P07951 284 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 CLTAP09496 248 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 STAG3L1P0CL83 205 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 KRT13P13646 458 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 DEKP35659 375 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 MAPK8P45983 427 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 KLK7P49862 253 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 OSTNP61366 133 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ENPEPQ07075 957 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 KCNMA1Q12791 1236 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 BFSP2Q13515 415 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 SYCP1Q15431 976 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 SLC10A6Q3KNW5 377 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 DCAF4L1Q3SXM0 396 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 CBWD6Q4V339 395 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 CBWD3Q5JTY5 395 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 CBWD5Q5RIA9 395 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 TCERG1LQ5VWI1 586 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 DPY19L2P1Q6NXN4 242 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 NOTUMQ6P988 496 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 NECAB2Q7Z6G3 386 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 BRSK2Q8IWQ3 736 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 GJD3Q8N144 294 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 USP38Q8NB14 1042 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 SMG8Q8ND04 991 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ZDHHC1Q8WTX9 485 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ANP32BQ92688 251 aaKnown RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 FAM84AQ96KN4 292 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ERGIC2Q96RQ1 377 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 PDE11AQ9HCR9 933 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 CHST12Q9NRB3 414 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 TOPORSQ9NS56 1045 aaPredicted RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 RBAKQ9NYW8 714 aaPredicted RBP7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 TBX21Q9UL17 535 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ZNF232Q9UNY5 417 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 ATP11BQ9Y2G3 1177 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 SIK3Q9Y2K2 1263 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 HTTP42858 3142 aa7.62□□□□□ -1.19
LSM3P3-201ENST00000436601 A0A1W2PQC6 194 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 LACTBL1A8MY62 500 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 PES1O00541 588 aaKnown RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 TPM3P06753 285 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 CXCL8P10145 99 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 DLATP10515 647 aaKnown RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 GCLMP48507 274 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 FMO5P49326 533 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 POU5F1Q01860 360 aaKnown RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 APBA1Q02410 837 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 CCDC173Q0VFZ6 552 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms