RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OFD1O75665 1012 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 CSF2RAP15509 400 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 MFAP3P55082 362 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 JAM2P57087 298 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 ZNF699Q32M78 642 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 COL13A1Q5TAT6 717 aaPredicted RBP24.75■■□□□ 1.55
CPSF4-204ENST00000436336 SPOPLQ6IQ16 392 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 ENOSF1Q7L5Y1 443 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 HTATIP2Q9BUP3 242 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 XYLT2Q9H1B5 865 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 MIOSQ9NXC5 875 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 PCDHB7Q9Y5E2 793 aa24.75■■□□□ 1.55
CPSF4-204ENST00000436336 STAU1O95793 577 aaKnown RBP24.74■■□□□ 1.55
CPSF4-204ENST00000436336 SCNN1GP51170 649 aa24.74■■□□□ 1.55
CPSF4-204ENST00000436336 GLB1LQ6UWU2 654 aa24.74■■□□□ 1.55
CPSF4-204ENST00000436336 SYN2Q92777 582 aaPredicted RBP24.74■■□□□ 1.55
CPSF4-204ENST00000436336 VRTNQ9H8Y1 702 aa24.74■■□□□ 1.55
CPSF4-204ENST00000436336 APOBEC3GQ9HC16 384 aaKnown RBP24.74■■□□□ 1.55
CPSF4-204ENST00000436336 PLAGL2Q9UPG8 496 aa24.74■■□□□ 1.55
CPSF4-204ENST00000436336 FNDC1Q4ZHG4 1894 aaPredicted RBP24.74■■□□□ 1.55
CPSF4-204ENST00000436336 CLSTN1O94985 981 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 HNRNPH3P31942 346 aaKnown RBP24.73■■□□□ 1.55
CPSF4-204ENST00000436336 AFF1P51825 1210 aaKnown RBP24.73■■□□□ 1.55
CPSF4-204ENST00000436336 SOX4Q06945 474 aaPredicted RBP24.73■■□□□ 1.55
CPSF4-204ENST00000436336 GRIK3Q13003 919 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 NAB2Q15742 525 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 TMEM130Q8N3G9 435 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 CCDC112Q8NEF3 446 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 ELMO3Q96BJ8 720 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 FAXDC2Q96IV6 333 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 LRFN2Q9ULH4 789 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 NUB1Q9Y5A7 615 aa24.73■■□□□ 1.55
CPSF4-204ENST00000436336 ANO9A1A5B4 782 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 NRDCO43847 1150 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 TBXAS1P24557 533 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-204ENST00000436336 LRPAP1P30533 357 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 DRAP1Q14919 205 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-204ENST00000436336 ARHGAP44Q17R89 818 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 SFMBT2Q5VUG0 894 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 C9orf57Q5W0N0 161 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 LRRC52Q8N7C0 313 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 KREMEN1Q96MU8 473 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 ZNHIT6Q9NWK9 470 aaKnown RBP24.72■■□□□ 1.55
CPSF4-204ENST00000436336 ABHD14A-ACY1A0A1B0GW23 586 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 F8VZ95 297 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 PIRO00625 290 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 FECHP22830 423 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 STAT1P42224 750 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 MYO1EQ12965 1108 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 ZNF667Q5HYK9 610 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 CLLU1OSQ5K130 101 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 FMNL3Q8IVF7 1028 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 C7orf61Q8IZ16 206 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 CRIPAKQ8N1N5 446 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 JAKMIP2Q96AA8 810 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 HPDLQ96IR7 371 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 BAG1Q99933 345 aaPredicted RBP24.72■■□□□ 1.55
CPSF4-204ENST00000436336 GPR88Q9GZN0 384 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 KCNF1Q9H3M0 494 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 AIPL1Q9NZN9 384 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 INPP5FQ9Y2H2 1132 aa24.72■■□□□ 1.55
CPSF4-204ENST00000436336 MKI67P46013 3256 aaKnown RBP24.71■■□□□ 1.55
CPSF4-204ENST00000436336 HOXA2O43364 376 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 CUL2Q13617 745 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 MEA1Q16626 185 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 NPAS4Q8IUM7 802 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 URGCPQ8TCY9 931 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 KAT5Q92993 513 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 ZNF830Q96NB3 372 aaPredicted RBP24.71■■□□□ 1.55
CPSF4-204ENST00000436336 NIF3L1Q9GZT8 377 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 GOLGA2P5Q9HBQ8 144 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 IL23AQ9NPF7 189 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 KANSL3Q9P2N6 904 aa24.71■■□□□ 1.55
CPSF4-204ENST00000436336 EFCAB14O75071 495 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 POMCP01189 267 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 FGFR1P11362 822 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 CCZ1BP86790 482 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 CCZ1P86791 482 aaPredicted RBP24.7■■□□□ 1.54
CPSF4-204ENST00000436336 TMEM139Q8IV31 216 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 ZNF560Q96MR9 790 aa24.7■■□□□ 1.54
CPSF4-204ENST00000436336 SOX5P35711 763 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 PNPLA4P41247 253 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 PPIGQ13427 754 aaKnown RBP eCLIP24.69■■□□□ 1.542e-6■□□□□ 10.7
CPSF4-204ENST00000436336 WDR72Q3MJ13 1102 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 NOMO2Q5JPE7 1267 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 WDR59Q6PJI9 974 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 RSPH1Q8WYR4 309 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 SHC3Q92529 594 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 PPEF2O14830 753 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 P4HA1P13674 534 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 CDK17Q00537 523 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 TUSC3Q13454 348 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 E4F1Q66K89 784 aaPredicted RBP24.69■■□□□ 1.54
CPSF4-204ENST00000436336 SMYD5Q6GMV2 418 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.69■■□□□ 1.543e-9■■■■■ 29.7
CPSF4-204ENST00000436336 ABI1Q8IZP0 508 aa24.69■■□□□ 1.54
CPSF4-204ENST00000436336 FOXN3O00409 490 aaPredicted RBP24.68■■□□□ 1.54
CPSF4-204ENST00000436336 EVI5O60447 810 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 BAIAP3O94812 1187 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 FERP16591 822 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms