RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 CLCN4P51793 760 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 CREMQ03060 361 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 PSMD5Q16401 504 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 PUS10Q3MIT2 529 aaKnown RBP22.71■■□□□ 1.23
GTF3A-203ENST00000435781 NT5DC4Q86YG4 428 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 CBWD2Q8IUF1 395 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 SMRP1Q8NCR6 262 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 GOLGA5Q8TBA6 731 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 LNX1Q8TBB1 728 aaPredicted RBP22.71■■□□□ 1.23
GTF3A-203ENST00000435781 SUSD3Q96L08 255 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 FBXL18Q96ME1 805 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 KCTD10Q9H3F6 313 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 KIAA1586Q9HCI6 787 aa22.71■■□□□ 1.23
GTF3A-203ENST00000435781 GRXCR2A6NFK2 248 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 ZNF233A6NK53 670 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 PPEF2O14830 753 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 KINO60870 393 aaKnown RBP22.7■■□□□ 1.22
GTF3A-203ENST00000435781 MCM4P33991 863 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 SMAD4Q13485 552 aaKnown RBP22.7■■□□□ 1.22
GTF3A-203ENST00000435781 PDXDC1Q6P996 788 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 XXYLT1Q8NBI6 393 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 PDE11AQ9HCR9 933 aa22.7■■□□□ 1.22
GTF3A-203ENST00000435781 HOOK1Q9UJC3 728 aaKnown RBP22.7■■□□□ 1.22
GTF3A-203ENST00000435781 ANO9A1A5B4 782 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
GTF3A-203ENST00000435781 SYN3O14994 580 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 MBTPS2O43462 519 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 AARSP49588 968 aaKnown RBP eCLIP22.69■■□□□ 1.22
GTF3A-203ENST00000435781 UBE2HP62256 183 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 SNRNP35Q16560 246 aaKnown RBP22.69■■□□□ 1.22
GTF3A-203ENST00000435781 C9orf57Q5W0N0 161 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 SYCE2Q6PIF2 218 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 GLYCTKQ8IVS8 523 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 ELOA2Q8IYF1 753 aaPredicted RBP22.69■■□□□ 1.22
GTF3A-203ENST00000435781 ERCC4Q92889 916 aaPredicted RBP22.69■■□□□ 1.22
GTF3A-203ENST00000435781 DZANK1Q9NVP4 752 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 DPP3Q9NY33 737 aa22.69■■□□□ 1.22
GTF3A-203ENST00000435781 PIRO00625 290 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 PDXKO00764 312 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 KIF20AO95235 890 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 SMC2O95347 1197 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 GLUD1P00367 558 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 IL9P15248 144 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 HOXB8P17481 243 aaPredicted RBP22.68■■□□□ 1.22
GTF3A-203ENST00000435781 TFAMQ00059 246 aaKnown RBP22.68■■□□□ 1.22
GTF3A-203ENST00000435781 GUF1Q8N442 669 aaKnown RBP22.68■■□□□ 1.22
GTF3A-203ENST00000435781 SPATA20Q8TB22 786 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 ADAMTS19Q8TE59 1207 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 FAM84AQ96KN4 292 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 GSDMAQ96QA5 445 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 CLSTN3Q9BQT9 956 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 RMND1Q9NWS8 449 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 MTRRQ9UBK8 725 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 FAM50BQ9Y247 325 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 PCDHA5Q9Y5H7 936 aa22.68■■□□□ 1.22
GTF3A-203ENST00000435781 ADAM12O43184 909 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 PRPF40AO75400 957 aaKnown RBP22.67■■□□□ 1.22
GTF3A-203ENST00000435781 SURF1Q15526 300 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 VARS2Q5ST30 1063 aaKnown RBP22.67■■□□□ 1.22
GTF3A-203ENST00000435781 CLEC17AQ6ZS10 378 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 ANKS3Q6ZW76 656 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 PALB2Q86YC2 1186 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 RDH13Q8NBN7 331 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 SMARCE1Q969G3 411 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 APOL5Q9BWW9 433 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 S1PR5Q9H228 398 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 PCDHB8Q9UN66 801 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 USP15Q9Y4E8 981 aaPredicted RBP22.67■■□□□ 1.22
GTF3A-203ENST00000435781 DOCK6Q96HP0 2047 aa22.67■■□□□ 1.22
GTF3A-203ENST00000435781 PTPRJQ12913 1337 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 M0QZQ0 153 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 EXOC3O60645 756 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 C1RP00736 705 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 LILRA4P59901 499 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 CYP24A1Q07973 514 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 SMAD2Q15796 467 aaKnown RBP22.66■■□□□ 1.22
GTF3A-203ENST00000435781 SLC9A9Q8IVB4 645 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 SMYD4Q8IYR2 804 aaPredicted RBP22.66■■□□□ 1.22
GTF3A-203ENST00000435781 CACTINQ8WUQ7 758 aaKnown RBP22.66■■□□□ 1.22
GTF3A-203ENST00000435781 TMEM174Q8WUU8 243 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 COL25A1Q9BXS0 654 aaPredicted RBP22.66■■□□□ 1.22
GTF3A-203ENST00000435781 MAN1C1Q9NR34 630 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 DMAC2Q9NW81 257 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 BACE2Q9Y5Z0 518 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 DENND4AQ7Z401 1863 aa22.66■■□□□ 1.22
GTF3A-203ENST00000435781 SPTLC1O15269 473 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 TGM5O43548 720 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 NR3C1P04150 777 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 PAX3P23760 479 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 MRPL58Q14197 206 aaKnown RBP22.65■■□□□ 1.22
GTF3A-203ENST00000435781 LMBRD2Q68DH5 695 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-203ENST00000435781 LILRA6Q6PI73 481 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 RSPO2Q6UXX9 243 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-203ENST00000435781 C12orf76Q8N812 135 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-203ENST00000435781 C1orf127Q8N9H9 656 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 APPL2Q8NEU8 664 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 NECAB3Q96P71 396 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-203ENST00000435781 MTMR12Q9C0I1 747 aa22.65■■□□□ 1.22
GTF3A-203ENST00000435781 INTS13Q9NVM9 706 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms