RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 MTRRQ9UBK8 725 aa17.64■□□□□ 0.41
SMPD4-207ENST00000435455 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 I3L4J1 428 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 KLRC4O43908 158 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 EXTL3O43909 919 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 NFICP08651 508 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 HOXD13P35453 343 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 SNRPFP62306 86 aaKnown RBP17.63■□□□□ 0.41
SMPD4-207ENST00000435455 PSMD2Q13200 908 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 LILRA6Q6PI73 481 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 NT5DC4Q86YG4 428 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 BRSK2Q8IWQ3 736 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 APPL2Q8NEU8 664 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 CMASQ8NFW8 434 aaPredicted RBP17.63■□□□□ 0.41
SMPD4-207ENST00000435455 CCDC47Q96A33 483 aaKnown RBP17.63■□□□□ 0.41
SMPD4-207ENST00000435455 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 GOLPH3LQ9H4A5 285 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 SLC39A2Q9NP94 309 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 CGNQ9P2M7 1197 aaKnown RBP17.63■□□□□ 0.41
SMPD4-207ENST00000435455 BACE2Q9Y5Z0 518 aa17.63■□□□□ 0.41
SMPD4-207ENST00000435455 H7C4K7 107 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 TGM5O43548 720 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 ZNF202O95125 648 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 BMT2Q1RMZ1 405 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 ATAT1Q5SQI0 421 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 KANK3Q6NY19 840 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 CYP26C1Q6V0L0 522 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 KRBA2Q6ZNG9 492 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 HS2ST1Q7LGA3 356 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 GPD1LQ8N335 351 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 KREMEN2Q8NCW0 462 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 PCIF1Q9H4Z3 704 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 KIAA1586Q9HCI6 787 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 CD320Q9NPF0 282 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 RBAKQ9NYW8 714 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-207ENST00000435455 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
SMPD4-207ENST00000435455 OR1D2P34982 312 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
SMPD4-207ENST00000435455 AARSP49588 968 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMPD4-207ENST00000435455 GUCY2FP51841 1108 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 RAB33AQ14088 237 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 VARS2Q5ST30 1063 aaKnown RBP17.61■□□□□ 0.41
SMPD4-207ENST00000435455 TMC5Q6UXY8 1006 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 C15orf39Q6ZRI6 1047 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 GPR149Q86SP6 731 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 NELFCDQ8IXH7 590 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 ZSWIM2Q8NEG5 633 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
SMPD4-207ENST00000435455 CACTINQ8WUQ7 758 aaKnown RBP17.61■□□□□ 0.41
SMPD4-207ENST00000435455 RHOBTB2Q9BYZ6 727 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 ZDHHC7Q9NXF8 308 aa17.61■□□□□ 0.41
SMPD4-207ENST00000435455 C2orf16Q68DN1 1984 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 ANO9A1A5B4 782 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 ARHGEF37A1IGU5 675 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 ZNF233A6NK53 670 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 LOC730098B7Z3J9 87 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 M0QZQ0 153 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 RPN1P04843 607 aaKnown RBP17.6■□□□□ 0.41
SMPD4-207ENST00000435455 SPATA31D3P0C874 917 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 KMT5BQ4FZB7 885 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 C9orf57Q5W0N0 161 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 SPATA31D4Q6ZUB0 917 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 EFCAB13Q8IY85 973 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 POMKQ9H5K3 350 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 AGPAT3Q9NRZ7 376 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 DPP3Q9NY33 737 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 HSPBP1Q9NZL4 362 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 FBXW11Q9UKB1 542 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 NR2E1Q9Y466 385 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 CDY1Q9Y6F8 540 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 SCN1AP35498 2009 aa17.6■□□□□ 0.41
SMPD4-207ENST00000435455 DENND4AQ7Z401 1863 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 CCDC195A0A1B0GUA6 201 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 PIRO00625 290 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 ADAM12O43184 909 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 TGFB1I1O43294 461 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 PAPLNO95428 1278 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 LILRA4P59901 499 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 TFAMQ00059 246 aaKnown RBP17.59■□□□□ 0.41
SMPD4-207ENST00000435455 STK4Q13043 487 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
SMPD4-207ENST00000435455 SURF1Q15526 300 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 KNOP1Q1ED39 458 aaKnown RBP17.59■□□□□ 0.41
SMPD4-207ENST00000435455 LIN9Q5TKA1 542 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 SLC8B1Q6J4K2 584 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 ZNF280DQ6N043 979 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 DSTYKQ6XUX3 929 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 TMEM130Q8N3G9 435 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 GOLGA5Q8TBA6 731 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 RPGRIP1Q96KN7 1286 aa17.59■□□□□ 0.41
SMPD4-207ENST00000435455 PPEF2O14830 753 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 TBC1D4O60343 1298 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 ZMYND10O75800 440 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 KIF20AO95235 890 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 WEE2P0C1S8 567 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 CYP2J2P51589 502 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 DPYDQ12882 1025 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms