RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 CCNG2Q16589 344 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 RNF187Q5TA31 235 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 PLEKHA7Q6IQ23 1121 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CPLX4Q7Z7G2 160 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 EXD1Q8NHP7 514 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 C1orf54Q8WWF1 131 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CHMP6Q96FZ7 201 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 SCLT1Q96NL6 688 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 SERPINB12Q96P63 405 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 PARVAQ9NVD7 372 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 IP6K2Q9UHH9 426 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 WDR81Q562E7 1941 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 SIP14410 1827 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 THAP12O43422 761 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 MAFO75444 373 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 LSM8O95777 96 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 CALB1P05937 261 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 DRD4P21917 467 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TAP1Q03518 808 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TARBP2Q15633 366 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 LMBRD2Q68DH5 695 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TMEM270Q6UE05 265 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TAX1BP1Q86VP1 789 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 WDR49Q8IV35 697 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CCDC50Q8IVM0 306 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CCDC89Q8N998 374 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TCP11Q8WWU5 503 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 RBM41Q96IZ5 413 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 SEC16BQ96JE7 1060 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 CABS1Q96KC9 395 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 NSRP1Q9H0G5 558 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 CCDC134Q9H6E4 229 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 ANAPC5Q9UJX4 755 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 KIAA1217Q5T5P2 1943 aa11.08□□□□□ -0.63
CD44-210ENST00000434472 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 CNTNAP2Q9UHC6 1331 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 GOLGA6L7A0A1B0GV03 622 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 ASAP2O43150 1006 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 TCEA3O75764 348 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 TGFB3P10600 412 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 CHN1P15882 459 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 FGFR4P22455 802 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 STAT5BP51692 787 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 SP2Q02086 613 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 MCL1Q07820 350 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 IFT88Q13099 833 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 MAMLD1Q13495 774 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 SNX1Q13596 522 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 NCOA4Q13772 614 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 AUHQ13825 339 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 ZNF568Q3ZCX4 644 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 LRRC38Q5VT99 294 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 IER5Q5VY09 327 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 ZNF365Q70YC5 407 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 RCOR2Q8IZ40 523 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 SEPT1Q8WYJ6 367 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 CCDC77Q9BR77 488 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 C11orf70Q9BRQ4 267 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 MRPL4Q9BYD3 311 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 OSBPL8Q9BZF1 889 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 ZNF518BQ9C0D4 1074 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 HAPLN2Q9GZV7 340 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 C2orf40Q9H1Z8 148 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 APOBEC3GQ9HC16 384 aaKnown RBP11.08□□□□□ -0.64
CD44-210ENST00000434472 TMEM51Q9NW97 253 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 ANKFY1Q9P2R3 1169 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 UMODL1Q5DID0 1318 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
CD44-210ENST00000434472 GSTTP1A0A1W2PQM5 241 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 H0YHG0 523 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 TLR3O15455 904 aaKnown RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 CALCAP01258 141 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 UBA1P22314 1058 aaKnown RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 EDNRBP24530 442 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 ADCY8P40145 1251 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 ZNF132P52740 706 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms