RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 LMO3Q8TAP4 145 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 TAF4BQ92750 862 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 ERGIC2Q96RQ1 377 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 VRTNQ9H8Y1 702 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
LINC00339-204ENST00000434233 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 TMEM189-UBE2V1I3L0A0 370 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 PODXLO00592 558 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 NRP1O14786 923 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 AP5Z1O43299 807 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 ZC3H11AO75152 810 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00339-204ENST00000434233 PNPLA4P41247 253 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 OR1G1P47890 313 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 ALDH7A1P49419 539 aaKnown RBP13.26□□□□□ -0.29
LINC00339-204ENST00000434233 MYL6P60660 151 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 MYO1EQ12965 1108 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 SEMA4DQ92854 862 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
LINC00339-204ENST00000434233 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
LINC00339-204ENST00000434233 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 B4GALT3O60512 393 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
LINC00339-204ENST00000434233 LAG3P18627 525 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 SLC9A1P19634 815 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 PON1P27169 355 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 SLC11A1P49279 550 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 TAF6P49848 677 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 MRE11P49959 708 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 BCAR1P56945 870 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 LILRA4P59901 499 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
LINC00339-204ENST00000434233 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
LINC00339-204ENST00000434233 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 XYLT2Q9H1B5 865 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
LINC00339-204ENST00000434233 SCN1AP35498 2009 aa13.25□□□□□ -0.29
LINC00339-204ENST00000434233 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 PPEF2O14830 753 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 LRRN2O75325 713 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 B3GAT3O94766 335 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 PBX1P40424 430 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 RABGGTBP53611 331 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 SYCP1Q15431 976 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 SV2CQ496J9 727 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-204ENST00000434233 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 COLGALT1Q8NBJ5 622 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 TATDN2Q93075 761 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
LINC00339-204ENST00000434233 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
LINC00339-204ENST00000434233 A0A1W2PPC1 479 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 TRAPPC3O43617 180 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 TADA2AO75478 443 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 BMPR1AP36894 532 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 AARSP49588 968 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00339-204ENST00000434233 ZNF75DP51815 510 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 RAB30Q15771 203 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
LINC00339-204ENST00000434233 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms