RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PROM1O43490 865 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 ELFN1P0C7U0 828 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 SRGNP10124 158 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 WASP42768 502 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 CTXN1P60606 82 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 TMPRSS15P98073 1019 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-205ENST00000433888 ZNF788Q6ZQV5 615 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 CHAC2Q8WUX2 184 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 UROC1Q96N76 676 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 SLC2A13Q96QE2 648 aa5.24□□□□□ -1.57
PTPN4-205ENST00000433888 TRGV11A0A075B6L2 103 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 TLDC2A0PJX2 215 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 K7ESF4 209 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 MPPED1O15442 326 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 GPR39O43194 453 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 PEX1O43933 1283 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 WT1P19544 449 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-205ENST00000433888 AGXTP21549 392 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 GATA3P23771 443 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 NPM2Q86SE8 214 aaKnown RBP5.23□□□□□ -1.57
PTPN4-205ENST00000433888 TBC1D15Q8TC07 691 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 DPF2Q92785 391 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 MANSC1Q9H8J5 431 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 DNM3Q9UQ16 869 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 ENTPD2Q9Y5L3 495 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 GPR45Q9Y5Y3 372 aa5.23□□□□□ -1.57
PTPN4-205ENST00000433888 KIAA0391O15091 583 aaKnown RBP5.22□□□□□ -1.57
PTPN4-205ENST00000433888 YY2O15391 372 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 MAPK10P53779 464 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 TAF7LQ5H9L4 462 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 NLGN4YQ8NFZ3 816 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-205ENST00000433888 NRG4Q8WWG1 115 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 HEPHQ9BQS7 1158 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 TLR10Q9BXR5 811 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 C11orf54Q9H0W9 315 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-205ENST00000433888 CTTNBP2NLQ9P2B4 639 aa5.22□□□□□ -1.57
PTPN4-205ENST00000433888 PRAMEF33A0A0G2JMD5 474 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 PRAMEF10O60809 474 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 SBK3P0C264 359 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 HSD3B2P26439 372 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 TARDBPQ13148 414 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPN4-205ENST00000433888 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 KRT26Q7Z3Y9 468 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 TMPRSS9Q7Z410 1059 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 PEG10Q86TG7 708 aaKnown RBP5.21□□□□□ -1.58
PTPN4-205ENST00000433888 C1QTNF7Q9BXJ2 289 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 INTS13Q9NVM9 706 aa5.21□□□□□ -1.58
PTPN4-205ENST00000433888 HAUS5O94927 633 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 KCNA2P16389 499 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 POU3F3P20264 500 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-205ENST00000433888 ITPKBP27987 946 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 GRIA3P42263 894 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 ABCG1P45844 678 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 PTPRRQ15256 657 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 KAZNQ674X7 775 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 SPATS2Q86XZ4 545 aaKnown RBP5.2□□□□□ -1.58
PTPN4-205ENST00000433888 SLC30A5Q8TAD4 765 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 SCARB1Q8WTV0 552 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 COG1Q8WTW3 980 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 LPIN2Q92539 896 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 DPF1Q92782 380 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 SARAFQ96BY9 339 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 C7orf25Q9BPX7 421 aa5.2□□□□□ -1.58
PTPN4-205ENST00000433888 PHLDB1Q86UU1 1377 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 WDR27A2RRH5 827 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 CCDC151A5D8V7 595 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 TRIM75PA6NK02 468 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 KRTAP29-1A8MX34 341 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-205ENST00000433888 SUN1O94901 812 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 AGFG2O95081 481 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 ERBB2P04626 1255 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 VIL1P09327 827 aaKnown RBP5.19□□□□□ -1.58
PTPN4-205ENST00000433888 CREMQ03060 361 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 DYRK1AQ13627 763 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 NBPF8Q3BBV2 869 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 AKNAD1Q5T1N1 836 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 UTP14CQ5TAP6 766 aaKnown RBP5.19□□□□□ -1.58
PTPN4-205ENST00000433888 TSHZ1Q6ZSZ6 1077 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 GRASPQ7Z6J2 395 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-205ENST00000433888 RHOT1Q8IXI2 618 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 IL17RDQ8NFM7 739 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 WDR66Q8TBY9 1149 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 TFAP2BQ92481 460 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 LRIG1Q96JA1 1093 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 INTUQ9ULD6 942 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 AOX1Q06278 1338 aa5.19□□□□□ -1.58
PTPN4-205ENST00000433888 ADM5C9JUS6 153 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 GRM6O15303 877 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 HNRNPMP52272 730 aaKnown RBP eCLIP5.18□□□□□ -1.582e-6■■■■□ 19.5
PTPN4-205ENST00000433888 RPS7P62081 194 aaKnown RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 SRSF4Q08170 494 aaKnown RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 INAVAQ3KP66 663 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 PABPC1LQ4VXU2 614 aaKnown RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 RNF219Q5W0B1 726 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-205ENST00000433888 MICALCLQ6ZW33 695 aa5.18□□□□□ -1.58
PTPN4-205ENST00000433888 CLNKQ7Z7G1 428 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms