RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PCDHA10Q9Y5I2 948 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 SSC5DA1L4H1 1573 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 EMSYQ7Z589 1322 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 IGSF9BQ9UPX0 1349 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 SIP14410 1827 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GOLGA6L10A0A0M3HER8 536 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 TULP2O00295 520 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 DDX3YO15523 660 aaKnown RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 RAD51CO43502 376 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 BUB1BO60566 1050 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 ALAS1P13196 640 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CTNNA2P26232 953 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CARSP49589 748 aaKnown RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CYP2J2P51589 502 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 EIF3BP55884 814 aaKnown RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 BACE1P56817 501 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GCNT1Q02742 428 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GUCY2DQ02846 1103 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GRM1Q13255 1194 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 DMP1Q13316 513 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 BIRC3Q13489 604 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 DGKZQ13574 1117 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 COG2Q14746 738 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CYP1B1Q16678 543 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 NKAPLQ5M9Q1 402 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 C1orf220Q5T0J3 134 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 KRT39Q6A163 491 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CYP4F22Q6NT55 531 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 RUFY4Q6ZNE9 571 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 DAAM2Q86T65 1068 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GLYCTKQ8IVS8 523 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 ARFGAP2Q8N6H7 521 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 UBL4BQ8N7F7 174 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 C3orf20Q8ND61 904 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 DNERQ8NFT8 737 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 IL31RAQ8NI17 732 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 SLC35G2Q8TBE7 412 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 NSUN6Q8TEA1 469 aaKnown RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 PARD3BQ8TEW8 1205 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CASKIN2Q8WXE0 1202 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 MS4A14Q96JA4 679 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 RMDN3Q96TC7 470 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 KRT12Q99456 494 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GLIS2Q9BZE0 524 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 WNT8AQ9H1J5 351 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 RPAP3Q9H6T3 665 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 MARK1Q9P0L2 795 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 PARP2Q9UGN5 583 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 LCMT1Q9UIC8 334 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GGA2Q9UJY4 613 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GTF3C4Q9UKN8 822 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 TBX20Q9UMR3 447 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 CTDP1Q9Y5B0 961 aaPredicted RBP7.99□□□□□ -1.13
COL17A1-204ENST00000433822 GJA3Q9Y6H8 435 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 STYXL1Q9Y6J8 313 aa7.99□□□□□ -1.13
COL17A1-204ENST00000433822 A0A0G2JMZ2 1700 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 KIAA1217Q5T5P2 1943 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ELOA3DA6NLF2 546 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 FZD9O00144 591 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 KRIT1O00522 736 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 PODXLO00592 558 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 BACH1O14867 736 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ZBTB39O15060 712 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 CEP104O60308 925 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 AOC2O75106 756 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 STBD1O95210 358 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ATG7O95352 703 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 CYP1A2P05177 515 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 PSAPP07602 524 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 TRIM49P0CI25 452 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 TRIM49CP0CI26 452 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 MYBL1P10243 752 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 KCNA2P16389 499 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ECHS1P30084 290 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 BPIFB4P59827 614 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 GPC5P78333 572 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 SLC7A5Q01650 507 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 PPP3CAQ08209 521 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 LAMC2Q13753 1193 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ZYXQ15942 572 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ELOA3BQ3SY89 546 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 GNPTABQ3T906 1256 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 XKR9Q5GH70 373 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 SAMD5Q5TGI4 173 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 AGBL2Q5U5Z8 902 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ARHGEF16Q5VV41 709 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 GJB7Q6PEY0 223 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 KDM7AQ6ZMT4 941 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 C15orf39Q6ZRI6 1047 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 MIGA2Q7L4E1 593 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 SPATS2Q86XZ4 545 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 TSEN2Q8NCE0 465 aaKnown RBP7.98□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF280CQ8ND82 737 aa7.98□□□□□ -1.13
COL17A1-204ENST00000433822 FBXL13Q8NEE6 735 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms