RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 KRT17Q04695 432 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 TYRO3Q06418 890 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 DUOXA2Q1HG44 320 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 C11orf57Q6ZUT1 292 aaPredicted RBP15.55■□□□□ 0.08
CSTF3-202ENST00000431742 FILIP1Q7Z7B0 1213 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 HASPINQ8TF76 798 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 MRPL38Q96DV4 380 aaKnown RBP15.55■□□□□ 0.08
CSTF3-202ENST00000431742 ANKRD36BP1Q96IX9 119 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 HERC2P3Q9BVR0 1158 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 GPR62Q9BZJ7 368 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 ZBP1Q9H171 429 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 TLR9Q9NR96 1032 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 LMCD1Q9NZU5 365 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 SIX4Q9UIU6 781 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 IKBKBO14920 756 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 TADA2AO75478 443 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 LETM1O95202 739 aaPredicted RBP15.54■□□□□ 0.08
CSTF3-202ENST00000431742 TNNC2P02585 160 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 SOD2P04179 222 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 ITGB3P05106 788 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 TNNI1P19237 187 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 VAMP7P51809 220 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 AP3M2P53677 418 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 MARSP56192 900 aaKnown RBP15.54■□□□□ 0.08
CSTF3-202ENST00000431742 ERVFC1P60507 584 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 SCARA3Q6AZY7 606 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 C15orf39Q6ZRI6 1047 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 TRAPPC11Q7Z392 1133 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 USP37Q86T82 979 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 MYLIPQ8WY64 445 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 CHST7Q9NS84 486 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
CSTF3-202ENST00000431742 MTCH2Q9Y6C9 303 aa15.54■□□□□ 0.08
CSTF3-202ENST00000431742 MTCL1Q9Y4B5 1905 aaKnown RBP15.54■□□□□ 0.08
CSTF3-202ENST00000431742 SYCE3A1L190 88 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 C4BPAP04003 597 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 TRIM49P0CI25 452 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 TRIM49CP0CI26 452 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 CTSAP10619 480 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 KRT13P13646 458 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 PAX3P23760 479 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 POLR2BP30876 1174 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 IRS1P35568 1242 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 BRCC3P46736 316 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 LILRA4P59901 499 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 PTPROQ16827 1216 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 ZACNQ401N2 412 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 TAS1R1Q7RTX1 841 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 FRMD5Q7Z6J6 570 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 IRF2BP1Q8IU81 584 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 VPS52Q8N1B4 723 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 LRRC52Q8N7C0 313 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 SUSD3Q96L08 255 aa15.53■□□□□ 0.08
CSTF3-202ENST00000431742 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 SRRTQ9BXP5 876 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 METTL14Q9HCE5 456 aaKnown RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-202ENST00000431742 I3L4J1 428 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 M0QZQ0 153 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 SPTLC1O15269 473 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 GNA14O95837 355 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 FGFR3P22607 806 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 DSG1Q02413 1049 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 PPP3CAQ08209 521 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 ZSCAN23Q3MJ62 389 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 PDE12Q6L8Q7 609 aaKnown RBP15.52■□□□□ 0.08
CSTF3-202ENST00000431742 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.52■□□□□ 0.08
CSTF3-202ENST00000431742 GPR65Q8IYL9 337 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 ENOX1Q8TC92 643 aaKnown RBP15.52■□□□□ 0.08
CSTF3-202ENST00000431742 SLC35C1Q96A29 364 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 ZNF560Q96MR9 790 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 TCF25Q9BQ70 676 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 DNAJC25Q9H1X3 360 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 AGAP1Q9UPQ3 857 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 NUB1Q9Y5A7 615 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 PCDHGC5Q9Y5F6 944 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 IRAK3Q9Y616 596 aa15.52■□□□□ 0.08
CSTF3-202ENST00000431742 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.07
CSTF3-202ENST00000431742 TRAPPC3O43617 180 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 LILRB3O75022 631 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 VNN1O95497 513 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
CSTF3-202ENST00000431742 CCDC192P0DO97 292 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 GTF2H1P32780 548 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 PNPLA4P41247 253 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 GLUD2P49448 558 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 TAF6P49848 677 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 RBP5P82980 135 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 SMC1AQ14683 1233 aaKnown RBP15.51■□□□□ 0.07
CSTF3-202ENST00000431742 PTPN14Q15678 1187 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 USP41Q3LFD5 358 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 ANO6Q4KMQ2 910 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 RTP2Q5QGT7 225 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 FAM171A1Q5VUB5 890 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 KIAA0319Q5VV43 1072 aa15.51■□□□□ 0.07
CSTF3-202ENST00000431742 SV2AQ7L0J3 742 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms