RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CCDC170Q8IYT3 715 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 C1orf127Q8N9H9 656 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 TAF4BQ92750 862 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 PI4K2AQ9BTU6 479 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 GPR88Q9GZN0 384 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 PARP2Q9UGN5 583 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 ITGA11Q9UKX5 1188 aa19.61■□□□□ 0.73
HMGN1-206ENST00000431390 MGEA5O60502 916 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 PARNO95453 639 aaKnown RBP19.6■□□□□ 0.73
HMGN1-206ENST00000431390 CST3P01034 146 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-206ENST00000431390 CCDC172P0C7W6 258 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 FERP16591 822 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 PRKCIP41743 596 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 NOP14P78316 857 aaKnown RBP19.6■□□□□ 0.73
HMGN1-206ENST00000431390 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 ZBTB6Q15916 424 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 ARHGAP44Q17R89 818 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 HGSNATQ68CP4 663 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 SMYD5Q6GMV2 418 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 RAD9BQ6WBX8 426 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 TATDN2Q93075 761 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 JAKMIP2Q96AA8 810 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 FAXDC2Q96IV6 333 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 KREMEN1Q96MU8 473 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 IFIH1Q9BYX4 1025 aaKnown RBP19.6■□□□□ 0.73
HMGN1-206ENST00000431390 KCND1Q9NSA2 647 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 ARHGAP20Q9P2F6 1191 aa19.6■□□□□ 0.73
HMGN1-206ENST00000431390 BZW2Q9Y6E2 419 aaKnown RBP19.6■□□□□ 0.73
HMGN1-206ENST00000431390 SPTBN5Q9NRC6 3674 aaKnown RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 TMEM265A0A087WTH1 108 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 A0A0U1RQF3 1178 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 SSU72P8A0A1W2PR75 194 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 XPOTO43592 962 aaKnown RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 ITGA4P13612 1032 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 TBXAS1P24557 533 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 ATICP31939 592 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 FPGSQ05932 587 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 IRF2BP2Q7Z5L9 587 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 CXorf38Q8TB03 319 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 SHC3Q92529 594 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 ADAM2Q99965 735 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 FTHL17Q9BXU8 183 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 NHEJ1Q9H9Q4 299 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 APOBEC3GQ9HC16 384 aaKnown RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 TMEM39AQ9NV64 488 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 DPP3Q9NY33 737 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 SIX4Q9UIU6 781 aa19.59■□□□□ 0.73
HMGN1-206ENST00000431390 UBQLN1Q9UMX0 589 aaKnown RBP19.59■□□□□ 0.73
HMGN1-206ENST00000431390 CYLC1P35663 651 aaPredicted RBP19.58■□□□□ 0.73
HMGN1-206ENST00000431390 MYL6P60660 151 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 BEST2Q8NFU1 509 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 ZMAT2Q96NC0 199 aaKnown RBP19.58■□□□□ 0.73
HMGN1-206ENST00000431390 XYLT2Q9H1B5 865 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 HIPK3Q9H422 1215 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 VRTNQ9H8Y1 702 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.58■□□□□ 0.731e-9■■■■■ 62.2
HMGN1-206ENST00000431390 RGS18Q9NS28 235 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 GIT1Q9Y2X7 761 aa19.58■□□□□ 0.73
HMGN1-206ENST00000431390 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.58■□□□□ 0.73
HMGN1-206ENST00000431390 SMIM28A0A1B0GU29 152 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 FOXN3O00409 490 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-206ENST00000431390 STAU1O95793 577 aaKnown RBP19.57■□□□□ 0.72
HMGN1-206ENST00000431390 ITGB3P05106 788 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 RBP5P82980 135 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 KLHL30Q0D2K2 578 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 MTF1Q14872 753 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF699Q32M78 642 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 TDRD12Q587J7 1177 aaKnown RBP19.57■□□□□ 0.72
HMGN1-206ENST00000431390 SPOPLQ6IQ16 392 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 KAT5Q92993 513 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 PGBD4Q96DM1 585 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 CCDC42Q96M95 316 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 KLK14Q9P0G3 267 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
HMGN1-206ENST00000431390 NUB1Q9Y5A7 615 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 EPN1Q9Y6I3 576 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-206ENST00000431390 CCP110O43303 1012 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 NBNO60934 754 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 GFPT2O94808 682 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 NDUFA10O95299 355 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 KRT19P08727 400 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 CYP3A5P20815 502 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 DNAJB2P25686 324 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 ANXA13P27216 316 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 CUL2Q13617 745 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 PLEKHG4Q58EX7 1191 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 FAM71AQ8IYT1 594 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 APBB2Q92870 758 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 NIF3L1Q9GZT8 377 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 CXCL16Q9H2A7 254 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 UBN1Q9NPG3 1134 aa19.57■□□□□ 0.72
HMGN1-206ENST00000431390 ZNF500O60304 480 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-206ENST00000431390 PLEKP08567 350 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-206ENST00000431390 POLR2BP30876 1174 aaKnown RBP19.56■□□□□ 0.72
HMGN1-206ENST00000431390 EIF4A3P38919 411 aaKnown RBP19.56■□□□□ 0.72
HMGN1-206ENST00000431390 ARID5AQ03989 594 aa19.56■□□□□ 0.72
HMGN1-206ENST00000431390 GPNMBQ14956 572 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms