RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 DPYSL4O14531 572 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 TNPO2O14787 897 aaKnown RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 ADAMTS4O75173 837 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 SASH3O75995 380 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 MTIF2P46199 727 aaKnown RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 PPP2R5EQ16537 467 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 CAMK4Q16566 473 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 AOC3Q16853 763 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 LRIT3Q3SXY7 679 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 C4orf22Q6V702 233 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 RNF19BQ6ZMZ0 732 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 RRAGAQ7L523 313 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 GSPT2Q8IYD1 628 aaKnown RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 ICA1LQ8NDH6 482 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 HUS1BQ8NHY5 278 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 PNPT1Q8TCS8 783 aaKnown RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 PDCD6IPQ8WUM4 868 aaKnown RBP5.65□□□□□ -1.5
PTPN4-203ENST00000430976 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 STAMBPL1Q96FJ0 436 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 TMEM245Q9H330 911 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 MOCS1Q9NZB8 636 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 PARP3Q9Y6F1 533 aa5.65□□□□□ -1.5
PTPN4-203ENST00000430976 LOC102724428A0A0B4J2F2 783 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NUTM2BA6NNL0 878 aaPredicted RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NUTM2EB1AL46 878 aaPredicted RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 MAGEB3O15480 346 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SLC25A17O43808 307 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PLOD3O60568 738 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 DKC1O60832 514 aaKnown RBP eCLIP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R37O75864 691 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NPTXRO95502 500 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TCP1P17987 556 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CHMLP26374 656 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 RPL9P32969 192 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TTKP33981 857 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 DPP6P42658 865 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 AFF3P51826 1226 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SIK1P57059 783 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 RNF4P78317 190 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CLDN10P78369 228 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 C19orf57Q0VDD7 668 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SQLEQ14534 574 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NCF4Q15080 339 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SLC14A2Q15849 920 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 FAM205BPQ63HN1 556 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TTBK2Q6IQ55 1244 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TMPRSS9Q7Z410 1059 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NUTM2AQ8IVF1 878 aaPredicted RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 NIM1KQ8IY84 436 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 BANPQ8N9N5 519 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 BEST2Q8NFU1 509 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 LILRB4Q8NHJ6 448 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 THRSPQ92748 146 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 INTS12Q96CB8 462 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 B3GALT6Q96L58 329 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 RIPOR3Q96MK2 946 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 FRMD8P1Q9BZ68 369 aaPredicted RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 RMND1Q9NWS8 449 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SIRT5Q9NXA8 310 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TAF4O00268 1085 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CCRL2O00421 344 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TSPAN4O14817 238 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 GOSR1O95249 250 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 FGRP09769 529 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 RABIFP47224 123 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF165P49910 485 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 GNAQP50148 359 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 STX5Q13190 355 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PEX6Q13608 980 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SLC9A5Q14940 896 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 LONRF2Q1L5Z9 754 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SH3D19Q5HYK7 790 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SNX30Q5VWJ9 437 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SIGIRRQ6IA17 410 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PMF1Q6P1K2 205 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 FASTKD5Q7L8L6 764 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 BRAPQ7Z569 592 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CDH24Q86UP0 819 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 MICALL2Q8IY33 904 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CNTD1Q8N815 330 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 LSMEM1Q8N8F7 131 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 LEMD2Q8NC56 503 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 ST7LQ8TDW4 575 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 TSPEARQ8WU66 669 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 ZFAND2BQ8WV99 257 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SLC39A13Q96H72 371 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CLIC6Q96NY7 704 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 CDADC1Q9BWV3 514 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 SLC13A1Q9BZW2 595 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 ROGDIQ9GZN7 287 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 OBP2AQ9NY56 170 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 GGA3Q9NZ52 723 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 STMN3Q9NZ72 180 aa5.65□□□□□ -1.51
PTPN4-203ENST00000430976 LARSQ9P2J5 1176 aaKnown RBP5.65□□□□□ -1.51
PTPN4-203ENST00000430976 PHTF1Q9UMS5 762 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms