RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NDST4Q9H3R1 872 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 CWH43Q9H720 699 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 GCNT4Q9P109 453 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 HCSTQ9UBK5 93 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 PRG3Q9Y2Y8 225 aaPredicted RBP11.86□□□□□ -0.51
CHD4-202ENST00000430771 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
CHD4-202ENST00000430771 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD4-202ENST00000430771 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
CHD4-202ENST00000430771 ANO9A1A5B4 782 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 LCHNA4D1U4 455 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 CBFA2T2O43439 604 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 B4GALT3O60512 393 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 B3GAT3O94766 335 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 KIF4AO95239 1232 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
CHD4-202ENST00000430771 HLA-DRAP01903 254 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 ALDH2P05091 517 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 P4HA1P13674 534 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 CTNNB1P35222 781 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 SLC11A1P49279 550 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
CHD4-202ENST00000430771 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 DCLRE1AQ6PJP8 1040 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 KCNT2Q6UVM3 1135 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 TAF4BQ92750 862 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 TMEM169Q96HH4 297 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 PLVAPQ9BX97 442 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 VPS16Q9H269 839 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 DNAJB4Q9UDY4 337 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 ADAM28Q9UKQ2 775 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 AGAP1Q9UPQ3 857 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
CHD4-202ENST00000430771 SCN1AP35498 2009 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 PIRO00625 290 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 NRP1O14786 923 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TRAPPC3O43617 180 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 GALTP07902 379 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 DNAJB2P25686 324 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TNNC1P63316 161 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 NOP14P78316 857 aaKnown RBP11.84□□□□□ -0.51
CHD4-202ENST00000430771 FANCCQ00597 558 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 UVSSAQ2YD98 709 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 LRIT3Q3SXY7 679 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 WDR44Q5JSH3 913 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 SLC39A11Q8N1S5 342 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TAS1R2Q8TE23 839 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TIFAQ96CG3 184 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
CHD4-202ENST00000430771 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
CHD4-202ENST00000430771 NKX2-4Q9H2Z4 354 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 VRTNQ9H8Y1 702 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 MARCH5Q9NX47 278 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
CHD4-202ENST00000430771 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
CHD4-202ENST00000430771 COQ4Q9Y3A0 265 aa11.84□□□□□ -0.51
CHD4-202ENST00000430771 TMEM265A0A087WTH1 108 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 LRRC10BA6NIK2 292 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 PPEF2O14830 753 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 TADA2AO75478 443 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 VNN1O95497 513 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 ASS1P00966 412 aaKnown RBP11.83□□□□□ -0.52
CHD4-202ENST00000430771 RB1P06400 928 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 ODC1P11926 461 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 MYOGP15173 224 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 PBX2P40425 430 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHD4-202ENST00000430771 UBASH3AP57075 661 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 MYL6P60660 151 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 UBXN1Q04323 297 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 EXOC3L4Q17RC7 722 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 FUT10Q6P4F1 479 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 SARM1Q6SZW1 724 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 APTXQ7Z2E3 356 aaKnown RBP11.83□□□□□ -0.52
CHD4-202ENST00000430771 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 IGSF21Q96ID5 467 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 HPDLQ96IR7 371 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 NT5C1BQ96P26 610 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 PAAF1Q9BRP4 392 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 SLC28A3Q9HAS3 691 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms