RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ASAP2O43150 1006 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ENTPD3O75355 529 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 P4HBP07237 508 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 QARSP47897 775 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 RWDD2BP57060 319 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 NLRP11P59045 1033 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MYO1EQ12965 1108 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 GALNTL6Q49A17 601 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 SYCP2LQ5T4T6 812 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 TDRD10Q5VZ19 366 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 KAZNQ674X7 775 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ACAD10Q6JQN1 1059 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MIS18BP1Q6P0N0 1132 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MCOLN2Q8IZK6 566 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 C12orf50Q8NA57 414 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PRR11Q96HE9 360 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF570Q96NI8 536 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MYCBPQ99417 103 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 WNT8AQ9H1J5 351 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ECT2Q9H8V3 914 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 CNOT10Q9H9A5 744 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ACTR5Q9H9F9 607 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 RAB20Q9NX57 234 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 NKX1-2Q9UD57 310 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 NAALADL1Q9UQQ1 740 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 STK38LQ9Y2H1 464 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MYH9P35579 1960 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 A0A1W2PPM1 405 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 GOLGA8SH3BPF8 625 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 GOLGA8MH3BSY2 632 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 BRAFP15056 766 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 GM2AP17900 193 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ALDH1B1P30837 517 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MAPK4P31152 587 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 HIRAP54198 1017 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 CYP24A1Q07973 514 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PGM5Q15124 567 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 TMED2Q15363 201 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 RAB6CQ53S08 254 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PRAMEF18Q5VWM3 479 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MFSD5Q6N075 450 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 C4orf33Q8N1A6 199 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC63Q8NA47 563 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 OR5B17Q8NGF7 314 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 LRRN4Q8WUT4 740 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ZBTB10Q96DT7 871 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 RIT2Q99578 217 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 RAB6CQ9H0N0 254 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC134Q9H6E4 229 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 GEMIN8Q9NWZ8 242 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 LARSQ9P2J5 1176 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PRKAG3Q9UGI9 489 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 CNOT7Q9UIV1 285 aaKnown RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 ZMYND8Q9ULU4 1186 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 LCTP09848 1927 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PASKQ96RG2 1323 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 PARP14Q460N5 1801 aa7.64□□□□□ -1.19
COL28A1-202ENST00000430711 TTC4O95801 387 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MAPTP10636 758 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GZMAP12544 262 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TAC1P20366 129 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ACO1P21399 889 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PDE6CP51160 858 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GPC3P51654 580 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 DNAJC3Q13217 504 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 SLC27A3Q5K4L6 730 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 C6orf118Q5T5N4 469 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 KRT39Q6A163 491 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CRELD2Q6UXH1 353 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MON1BQ7L1V2 547 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC50Q8IVM0 306 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC60Q8IWA6 550 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 C3orf20Q8ND61 904 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 SMC1BQ8NDV3 1235 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF668Q96K58 619 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TACO1Q9BSH4 297 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM109Q9BVC6 243 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 R3HDMLQ9H3Y0 253 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 A1CFQ9NQ94 594 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 RASAL2Q9UJF2 1139 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 DNPEPQ9ULA0 475 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 DIS3Q9Y2L1 958 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MRPL11Q9Y3B7 192 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 C2orf71A6NGG8 1288 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PODXLO00592 558 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 THAP12O43422 761 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ICAM1P05362 532 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GHRP10912 638 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PAX7P23759 505 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 KLRC2P26717 231 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ELF1P32519 619 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ADCY8P40145 1251 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CTCFP49711 727 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GDF10P55107 478 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 SP2Q02086 613 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PTP4A2Q12974 167 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 ORC1Q13415 861 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms