RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 RABGGTAQ92696 567 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 SLC35C1Q96A29 364 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 CNOT6LQ96LI5 555 aaKnown RBP19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 ZNF560Q96MR9 790 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 TMEM8AQ9HCN3 771 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 AGAP1Q9UPQ3 857 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 NUB1Q9Y5A7 615 aa19.54■□□□□ 0.72
CDC42EP1-203ENST00000430687 PMM2O15305 246 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 PHACTR2O75167 634 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 TRIM49P0CI25 452 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 TRIM49CP0CI26 452 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 PRKCSHP14314 528 aaPredicted RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 EEF1GP26641 437 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 POLR2BP30876 1174 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 AARSP49588 968 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 TAF6P49848 677 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 LILRA4P59901 499 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 PPP3CAQ08209 521 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 BMS1Q14692 1282 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 DCAF17Q5H9S7 520 aaPredicted RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 TCERG1LQ5VWI1 586 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 TDRD10Q5VZ19 366 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 KRT39Q6A163 491 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 FUT10Q6P4F1 479 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 LRSAM1Q6UWE0 723 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 GPR65Q8IYL9 337 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 C3orf58Q8NDZ4 430 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 ALG13Q9NP73 1137 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 SAMSN1Q9NSI8 373 aaKnown RBP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 LMCD1Q9NZU5 365 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 SIX4Q9UIU6 781 aa19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDC42EP1-203ENST00000430687 ANK1P16157 1881 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 PDCD11Q14690 1871 aaKnown RBP19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 ARHGEF37A1IGU5 675 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 EPOPA6NHQ4 379 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 F8W810 466 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 N4BP1O75113 896 aaKnown RBP19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 STAU1O95793 577 aaKnown RBP19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 SOD2P04179 222 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 KRT19P08727 400 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 ATICP31939 592 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 GCLMP48507 274 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 ZNF445P59923 1031 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 MYO1EQ12965 1108 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 BIRC3Q13489 604 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 TRPC3Q13507 836 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 GRIN2CQ14957 1233 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 NCAPHQ15003 741 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 PTPROQ16827 1216 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 SV2CQ496J9 727 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 POF1BQ8WVV4 589 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 SUSD3Q96L08 255 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 FANCLQ9NW38 375 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 SSX2IPQ9Y2D8 614 aa19.52■□□□□ 0.72
CDC42EP1-203ENST00000430687 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 KPNA7A9QM74 516 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 PPEF2O14830 753 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 GRM6O15303 877 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 P4HA2O15460 535 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 CST3P01034 146 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 POU3F3P20264 500 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 MXI1P50539 228 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 NCOA4Q13772 614 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 SGSM1Q2NKQ1 1148 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 USP41Q3LFD5 358 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 HASPINQ8TF76 798 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 TAF4BQ92750 862 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 ANP32EQ9BTT0 268 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 VN1R3Q9BXE9 311 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 GPR62Q9BZJ7 368 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 NGRNQ9NPE2 291 aaKnown RBP19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 TLR9Q9NR96 1032 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 CHST7Q9NS84 486 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 KIAA1671Q9BY89 1806 aa19.51■□□□□ 0.71
CDC42EP1-203ENST00000430687 BECN2A8MW95 431 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 KCNJ18B7U540 433 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 M0QZQ0 153 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 SYN3O14994 580 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 LPXNO60711 386 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 CTSAP10619 480 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 FGFR3P22607 806 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 MTIF2P46199 727 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 KCNH2Q12809 1159 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 KCNJ12Q14500 433 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 IQCB1Q15051 598 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 TIGD5Q53EQ6 642 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 TCP11X2Q5H9J9 407 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 PDXDC1Q6P996 788 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 CREBRFQ8IUR6 639 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 DHX40Q8IX18 779 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 TMEM130Q8N3G9 435 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 GDPD5Q8WTR4 605 aa19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 MRPL38Q96DV4 380 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-203ENST00000430687 HPDLQ96IR7 371 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms