RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 C1orf127Q8N9H9 656 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 PLEKHO2Q8TD55 490 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 TMC2Q8TDI7 906 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 NELFBQ8WX92 580 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 CCDC127Q96BQ5 260 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 SUSD3Q96L08 255 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 CDCA3Q99618 268 aaPredicted RBP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 TTPALQ9BTX7 342 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 MTMR12Q9C0I1 747 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 MRPL17Q9NRX2 175 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 PTPRJQ12913 1337 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 FSD2A1L4K1 749 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 TRIM49BA6NDI0 452 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 PPEF2O14830 753 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 NCK2O43639 380 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 TNNC2P02585 160 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 TNNI1P19237 187 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 FGFR3P22607 806 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 BRCC3P46736 316 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 AP3M2P53677 418 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 MCCD1P59942 119 aaPredicted RBP21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 PAK1Q13153 545 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 LMBRD2Q68DH5 695 aaPredicted RBP21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 KIAA1841Q6NSI8 718 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 INTS8Q75QN2 995 aaKnown RBP21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 ADGRD2Q7Z7M1 963 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 USP37Q86T82 979 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 FAM186BQ8IYM0 893 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 OR5B17Q8NGF7 314 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 CXorf38Q8TB03 319 aa21.69■■□□□ 1.06
CSNK1E-207ENST00000430335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 TULP1O00294 542 aaPredicted RBP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 SYN3O14994 580 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 SLC16A3O15427 465 aaKnown RBP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 NLRP12P59046 1061 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 LILRA4P59901 499 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 HYAL1Q12794 435 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 COL19A1Q14993 1142 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 CCDC85BQ15834 202 aaPredicted RBP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 DUSP6Q16828 381 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 RTP2Q5QGT7 225 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 PDXDC1Q6P996 788 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 AUTS2Q8WXX7 1259 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 PIK3R5Q8WYR1 880 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 CEP63Q96MT8 703 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 POP1Q99575 1024 aaKnown RBP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 TLE6Q9H808 572 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 RXFP1Q9HBX9 757 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 CTNND2Q9UQB3 1225 aa21.68■■□□□ 1.06
CSNK1E-207ENST00000430335 ATG2AQ2TAZ0 1938 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 LRRIQ3A6PVS8 624 aaPredicted RBP21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 M0QZQ0 153 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 ITGB3P05106 788 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 EPB41P11171 864 aaKnown RBP21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 PNPLA4P41247 253 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 TAF6P49848 677 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 RBP5P82980 135 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 CREMQ03060 361 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 CSGALNACT2Q8N6G5 542 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 LRRC52Q8N7C0 313 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 PPM1EQ8WY54 764 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 RIN2Q8WYP3 895 aaPredicted RBP21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 BORCS6Q96GS4 357 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 ZNF560Q96MR9 790 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 DUSP9Q99956 384 aaKnown RBP21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 EMILIN2Q9BXX0 1053 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 FNIP2Q9P278 1114 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 SIX4Q9UIU6 781 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 RWDD2AQ9UIY3 292 aa21.67■■□□□ 1.06
CSNK1E-207ENST00000430335 I3L4J1 428 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 IKBKBO14920 756 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 KRT13P13646 458 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 POLR2BP30876 1174 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 CA8P35219 290 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 NRIP1P48552 1158 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 VAMP7P51809 220 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 BFSP1Q12934 665 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 CT47A1Q5JQC4 288 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 RBM23Q86U06 439 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 CEP57Q86XR8 500 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 EFHBQ8N7U6 833 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 LNX1Q8TBB1 728 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 ZNF516Q92618 1163 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 EEF2KMTQ96G04 330 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 FAM84AQ96KN4 292 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 B3GALT6Q96L58 329 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 KLHL5Q96PQ7 755 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 TMEM63CQ9P1W3 806 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 DACH1Q9UI36 760 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 PCDHB8Q9UN66 801 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 AGAP1Q9UPQ3 857 aa21.66■■□□□ 1.06
CSNK1E-207ENST00000430335 ARHGEF37A1IGU5 675 aa21.65■■□□□ 1.06
CSNK1E-207ENST00000430335 C2CD2LO14523 706 aa21.65■■□□□ 1.06
CSNK1E-207ENST00000430335 SPTLC1O15269 473 aa21.65■■□□□ 1.06
CSNK1E-207ENST00000430335 TKTP29401 623 aaKnown RBP21.65■■□□□ 1.06
CSNK1E-207ENST00000430335 CTC1Q2NKJ3 1217 aa21.65■■□□□ 1.06
CSNK1E-207ENST00000430335 KLHL40Q2TBA0 621 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms