RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 GNRH1P01148 92 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 NFICP08651 508 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 HOXD10P28358 340 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 PAFAH1B1P43034 410 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 GJA9P57773 515 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 HIC1Q14526 733 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 RPS6KA1Q15418 735 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 JADE1Q6IE81 842 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 MTG1Q9BT17 334 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 OSGEPQ9NPF4 335 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 ANK1P16157 1881 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 RARBP10826 455 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 GNA15P30679 374 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 ZNF200P98182 395 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 NOTUMQ6P988 496 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
CALD1-207ENST00000430085 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 CNTN6Q9UQ52 1028 aa15.31■□□□□ 0.04
CALD1-207ENST00000430085 MROH7Q68CQ1 1323 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 SEPT4O43236 478 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 NPTXRO95502 500 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 CALCAP01258 141 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
CALD1-207ENST00000430085 GRM5P41594 1212 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 TMEM132DQ14C87 1099 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 CLEC16AQ2KHT3 1053 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 ACAD10Q6JQN1 1059 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 SLC27A1Q6PCB7 646 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 FBXO38Q6PIJ6 1188 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
CALD1-207ENST00000430085 SLFN11Q7Z7L1 901 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 GOLPH3Q9H4A6 298 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 RNF14Q9UBS8 474 aa15.3■□□□□ 0.04
CALD1-207ENST00000430085 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 KIF4AO95239 1232 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 PGK1P00558 417 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 CD58P19256 250 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 CD302Q8IX05 232 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 NME8Q8N427 588 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 ZNF653Q96CK0 615 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 XYLT2Q9H1B5 865 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 ITGB3P05106 788 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 AXLP30530 894 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 HOXA11P31270 313 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 HADHBP55084 474 aaKnown RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 CACNB2Q08289 660 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 SNX17Q15036 470 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 TCEAL1Q15170 157 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 TAF2Q6P1X5 1199 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 SCARA5Q6ZMJ2 495 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 TRIM72Q6ZMU5 477 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 CISHQ9NSE2 258 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 NXF1Q9UBU9 619 aaKnown RBP15.29■□□□□ 0.04
CALD1-207ENST00000430085 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 C2CD2Q9Y426 696 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
CALD1-207ENST00000430085 KCNK3O14649 394 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
CALD1-207ENST00000430085 THAP12O43422 761 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 RHOXF2BP0C7M4 288 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
CALD1-207ENST00000430085 HOXC8P31273 242 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 CRYBB1P53674 252 aaPredicted RBP15.28■□□□□ 0.04
CALD1-207ENST00000430085 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
CALD1-207ENST00000430085 TRIM32Q13049 653 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 PTPROQ16827 1216 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 NT5DC4Q86YG4 428 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 UBR7Q8N806 425 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 RAET1EQ8TD07 263 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 RHOXF2Q9BQY4 288 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 PARD6BQ9BYG5 372 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 SIX4Q9UIU6 781 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 GTF3C4Q9UKN8 822 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 COG5Q9UP83 839 aa15.28■□□□□ 0.04
CALD1-207ENST00000430085 CES2O00748 559 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms