RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 OTUD7BQ6GQQ9 843 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 XRRA1Q6P2D8 792 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 Q6ZPA2 131 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 COL23A1Q86Y22 540 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 MIER2Q8N344 545 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 ZBTB34Q8NCN2 500 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 VPS37AQ8NEZ2 397 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 REPS2Q8NFH8 660 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 SLC35G2Q8TBE7 412 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 CEP95Q96GE4 821 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 DCLRE1CQ96SD1 692 aaKnown RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 NDC1Q9BTX1 674 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 CPEB1Q9BZB8 566 aaKnown RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 GTPBP4Q9BZE4 634 aaKnown RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 KCNH6Q9H252 994 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 RIOX1Q9H6W3 641 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 PPCSQ9HAB8 311 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 SPON1Q9HCB6 807 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 ADARB2Q9NS39 739 aaKnown RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 AJAP1Q9UKB5 411 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 PHTF1Q9UMS5 762 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 SIK3Q9Y2K2 1263 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 ATRNL1Q5VV63 1379 aa3.72□□□□□ -1.81
HMGB1P9-201ENST00000429856 MASP2O00187 686 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 HTRA2O43464 458 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 DTNBO60941 627 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 FOSP01100 380 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 NBPF7P0C2Y1 421 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 RHCEP18577 417 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 ATP5JP18859 108 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 HTR3AP46098 478 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 SLC6A9P48067 706 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 RHDQ02161 417 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 TOB2Q14106 344 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 MORC3Q14149 939 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 LLGL1Q15334 1064 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 SAFBQ15424 915 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 GRAMD1BQ3KR37 738 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 RABL3Q5HYI8 236 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 ATXN7L2Q5T6C5 722 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 AFMIDQ63HM1 303 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 SEM1Q6ZVN7 128 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 BHLHA9Q7RTU4 235 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 OVCH2Q7RTZ1 564 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 GLCCI1Q86VQ1 547 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 XYLT1Q86Y38 959 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 RHOT1Q8IXI2 618 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 OR10H5Q8NGA6 315 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 OR2I1PQ8NGU4 316 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 FBXO41Q8TF61 875 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 DPF2Q92785 391 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 COA7Q96BR5 231 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 PGBD4Q96DM1 585 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 FAM193BQ96PV7 902 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 NUP88Q99567 741 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 ACO2Q99798 780 aaKnown RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 MRI1Q9BV20 369 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 NAA15Q9BXJ9 866 aaKnown RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 NMRK2Q9NPI5 230 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 TDP1Q9NUW8 608 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 FAM30AQ9NZY2 134 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 POGKQ9P215 609 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 EIF2B4Q9UI10 523 aaKnown RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 IPPQ9Y573 584 aa3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 CFAP20Q9Y6A4 193 aaKnown RBP3.71□□□□□ -1.82
HMGB1P9-201ENST00000429856 MYBBP1AQ9BQG0 1328 aaKnown RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ANO9A1A5B4 782 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 CCDC154A6NI56 674 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 TPP1O14773 563 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ERC2O15083 957 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 POMCP01189 267 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 SPATA31D3P0C874 917 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ALAS1P13196 640 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 DDCP20711 480 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 PTGS2P35354 604 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ALDH1A3P47895 512 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZNF280AP59817 542 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 KRTAP10-9P60411 292 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 KRTAP10-11P60412 298 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ATP8B2P98198 1209 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 CREMQ03060 361 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 PICALMQ13492 652 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 MTM1Q13496 603 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 RAB39AQ14964 217 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 UAP1L1Q3KQV9 507 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 INO80DQ53TQ3 878 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ANKS6Q68DC2 871 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 SPATA31D4Q6ZUB0 917 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 CHST15Q7LFX5 561 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 TTC7BQ86TV6 843 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 RSPH3Q86UC2 560 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 CCHCR1Q8TD31 782 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 DIS3LQ8TF46 1054 aaKnown RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZNF764Q96H86 408 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ELAC2Q9BQ52 826 aaKnown RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 SLC46A2Q9BY10 475 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 REXO4Q9GZR2 422 aaKnown RBP3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 LDAHQ9H6V9 325 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 RSAD1Q9HA92 442 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms