RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	POU2F2	P09086	479 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	GLUL	P15104	373 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	MARCKS	P29966	332 aa	Predicted RBP	19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	DHX8	Q14562	1220 aa	Known RBP	19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	UVSSA	Q2YD98	709 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	LIN9	Q5TKA1	542 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	FAM173B	Q6P4H8	233 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	RTL10	Q7L3V2	364 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	MYCT1	Q8N699	235 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	PJA1	Q8NG27	643 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	HINFP	Q9BQA5	517 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	RPP25	Q9BUL9	199 aa	Known RBP	19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	FOXQ1	Q9C009	403 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	PLEKHA5	Q9HAU0	1116 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	MTMR6	Q9Y217	621 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	CDY1	Q9Y6F8	540 aa		19.34	■□□□□ 0.69
MRPL28-203	ENST00000429738	TPR	P12270	2363 aa	Known RBP	19.33	■□□□□ 0.69
MRPL28-203	ENST00000429738	TTC26	A0AVF1	554 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738		K7ELQ4	463 aa	Predicted RBP	19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738		K7ENM7	598 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	SYN3	O14994	580 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	ADRB2	P07550	413 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	CLTA	P09496	248 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	CXCL8	P10145	99 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	GPC5	P78333	572 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	GTF2B	Q00403	316 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	MRPL58	Q14197	206 aa	Known RBP	19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZBTB6	Q15916	424 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	PPM1L	Q5SGD2	360 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	AXDND1	Q5T1B0	1012 aa	Predicted RBP	19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	SLC8B1	Q6J4K2	584 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	ST13P5	Q8NFI4	369 aa	Predicted RBP	19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	BICD1	Q96G01	975 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	CDH7	Q9ULB5	785 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	MYH15	Q9Y2K3	1946 aa		19.33	■□□□□ 0.68
MRPL28-203	ENST00000429738	HNRNPDL	O14979	420 aa	Known RBP	19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	TNFSF9	P41273	254 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	LIG4	P49917	911 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	KYAT1	Q16773	422 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	VARS2	Q5ST30	1063 aa	Known RBP	19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	SLC39A4	Q6P5W5	647 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	PARM1	Q6UWI2	310 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	GRASP	Q7Z6J2	395 aa	Predicted RBP	19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	MAP4K3	Q8IVH8	894 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	DCLK2	Q8N568	766 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	RASSF8	Q8NHQ8	419 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	SLC7A14	Q8TBB6	771 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	FGF14	Q92915	247 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	BORCS6	Q96GS4	357 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	SUSD3	Q96L08	255 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	ST6GALNAC4	Q9H4F1	302 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	STK17A	Q9UEE5	414 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	TUBGCP4	Q9UGJ1	667 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738	ANK1	P16157	1881 aa		19.32	■□□□□ 0.68
MRPL28-203	ENST00000429738		A0A0B4J269	797 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	LRRN2	O75325	713 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	ABLIM3	O94929	683 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	LRPAP1	P30533	357 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	ABCD1	P33897	745 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	ROR1	Q01973	937 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZBTB41	Q5SVQ8	909 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	MAML2	Q8IZL2	1156 aa	Predicted RBP	19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	SUMF1	Q8NBK3	374 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZNF461	Q8TAF7	563 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	CLIC6	Q96NY7	704 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	USP28	Q96RU2	1077 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	DDX23	Q9BUQ8	820 aa	Known RBP	19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	DLL3	Q9NYJ7	618 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	NUB1	Q9Y5A7	615 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	CACNA1B	Q00975	2339 aa		19.31	■□□□□ 0.68
MRPL28-203	ENST00000429738	KANSL1L	A0AUZ9	987 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	OGT	O15294	1046 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	XYLB	O75191	536 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	TBCA	O75347	108 aa	Known RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	KRT18	P05783	430 aa	Known RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	CYP3A5	P20815	502 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	NMT1	P30419	496 aa	Known RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	MATR3	P43243	847 aa	Known RBP eCLIP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	NTHL1	P78549	312 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	SNW1	Q13573	536 aa	Known RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	ENOX2	Q16206	610 aa	Known RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZNF528	Q3MIS6	628 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	MTSS1L	Q765P7	747 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	TMEM130	Q8N3G9	435 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	BCO2	Q9BYV7	579 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	CCDC39	Q9UFE4	941 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	SPTBN2	O15020	2390 aa		19.3	■□□□□ 0.68
MRPL28-203	ENST00000429738	MIA3	Q5JRA6	1907 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	WDR27	A2RRH5	827 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	LACTBL1	A8MY62	500 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	CCL16	O15467	120 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	STX6	O43752	255 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	KIN	O60870	393 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	MCM4	P33991	863 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	AARS	P49588	968 aa	Known RBP eCLIP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	CEBPZ	Q03701	1054 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	PRKCQ	Q04759	706 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	PPP2R3A	Q06190	1150 aa		19.29	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms