RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GCLCP48506 637 aaPredicted RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 TRMT10CQ7L0Y3 403 aaKnown RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 PLIN4Q96Q06 1357 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 NAV1Q8NEY1 1877 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 CD19P15391 556 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 KRT4P19013 534 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 ANKRD20A2Q5SQ80 823 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 ANKRD20A1Q5TYW2 823 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 ANKRD20A3Q5VUR7 823 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 CGB2Q6NT52 195 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 MTDHQ86UE4 582 aaKnown RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 ZBED4O75132 1171 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 TAC1P20366 129 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ANXA13P27216 316 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ATP5DP30049 168 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 STRN3Q13033 797 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 SLC1A5Q15758 541 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 VPS72Q15906 364 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 MFSD7Q6UXD7 560 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 TTC17Q96AE7 1141 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 MARCOQ9UEW3 520 aaPredicted RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 CDH16O75309 829 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 DRG2P55039 364 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 LVRNQ6Q4G3 990 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 BZW1Q7L1Q6 419 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 SHC3Q92529 594 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 SERPINB12Q96P63 405 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 CEP350Q5VT06 3117 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 FAM47DPA6NHR8 397 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 TP73O15350 636 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 WEE2P0C1S8 567 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 GNA15P30679 374 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 ANKRD35Q8N283 1001 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 PSPC1Q8WXF1 523 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 LAMB1P07942 1786 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
CDH3-202ENST00000429102 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
CDH3-202ENST00000429102 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 NPR1P16066 1061 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 CCNHP51946 323 aaPredicted RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 HIRAP54198 1017 aaPredicted RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 BASP1P80723 227 aaKnown RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 CD101Q93033 1021 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 ADRA1DP25100 572 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 NLRP11P59045 1033 aaKnown RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 BNIP1Q12981 228 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 RCN2Q14257 317 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.29
CDH3-202ENST00000429102 ARMCX1Q9P291 453 aa13.21□□□□□ -0.29
CDH3-202ENST00000429102 CFAP73A6NFT4 308 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 CCNE2O96020 404 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 TFDP1Q14186 410 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 FAXCQ5TGI0 409 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 CCDC89Q8N998 374 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 LRRC19Q9H756 370 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 RXFP1Q9HBX9 757 aa13.21□□□□□ -0.3
CDH3-202ENST00000429102 FSCN2O14926 492 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 KRT19P08727 400 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 GZMAP12544 262 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 BRD2P25440 801 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms