RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 MICAL1Q8TDZ2 1067 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 ZNF516Q92618 1163 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 CEP63Q96MT8 703 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 MED15Q96RN5 788 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 ENTPD7Q9NQZ7 604 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 ITGA11Q9UKX5 1188 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 NUB1Q9Y5A7 615 aa24.12■■□□□ 1.45
PTPN18-205ENST00000428843 SLC16A3O15427 465 aaKnown RBP24.11■■□□□ 1.45
PTPN18-205ENST00000428843 ITGB3P05106 788 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 CTSAP10619 480 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 KRT13P13646 458 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 VAMP7P51809 220 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 CLDN10P78369 228 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 BFSP1Q12934 665 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 SCARA3Q6AZY7 606 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 PDE12Q6L8Q7 609 aaKnown RBP24.11■■□□□ 1.45
PTPN18-205ENST00000428843 CXorf38Q8TB03 319 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 BORCS6Q96GS4 357 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 VWA8A3KMH1 1905 aa24.11■■□□□ 1.45
PTPN18-205ENST00000428843 PRRC2BQ5JSZ5 2229 aaKnown RBP24.11■■□□□ 1.45
PTPN18-205ENST00000428843 MYO7AQ13402 2215 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 I3L4J1 428 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 POLR2BP30876 1174 aaKnown RBP24.1■■□□□ 1.45
PTPN18-205ENST00000428843 ELAVL2Q12926 359 aaKnown RBP24.1■■□□□ 1.45
PTPN18-205ENST00000428843 C1orf220Q5T0J3 134 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 FAM171A1Q5VUB5 890 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 FILIP1Q7Z7B0 1213 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 MICALL1Q8N3F8 863 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 AUTS2Q8WXX7 1259 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 B3GALT6Q96L58 329 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 NGRNQ9NPE2 291 aaKnown RBP24.1■■□□□ 1.45
PTPN18-205ENST00000428843 SIX4Q9UIU6 781 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 AGAP1Q9UPQ3 857 aa24.1■■□□□ 1.45
PTPN18-205ENST00000428843 TRAPPC3O43617 180 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 CXCL14O95715 111 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 KRT19P08727 400 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 ERCC5P28715 1186 aaPredicted RBP24.09■■□□□ 1.45
PTPN18-205ENST00000428843 ENPEPQ07075 957 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 SMC1AQ14683 1233 aaKnown RBP24.09■■□□□ 1.45
PTPN18-205ENST00000428843 BMS1Q14692 1282 aaKnown RBP24.09■■□□□ 1.45
PTPN18-205ENST00000428843 STX1AQ16623 288 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 USP41Q3LFD5 358 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 TIGD5Q53EQ6 642 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 TRAPPC11Q7Z392 1133 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 USP37Q86T82 979 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 SUSD3Q96L08 255 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 SRRTQ9BXP5 876 aaKnown RBP24.09■■□□□ 1.45
PTPN18-205ENST00000428843 NSUN3Q9H649 340 aaKnown RBP24.09■■□□□ 1.45
PTPN18-205ENST00000428843 CHST7Q9NS84 486 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 ANO10Q9NW15 660 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 TRANK1O15050 2925 aa24.09■■□□□ 1.45
PTPN18-205ENST00000428843 HIDE1A8MVS5 230 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 SPTLC1O15269 473 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 URODP06132 367 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 TRIM49P0CI25 452 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 TRIM49CP0CI26 452 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 CA8P35219 290 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 GLUD2P49448 558 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 AARSP49588 968 aaKnown RBP eCLIP24.08■■□□□ 1.45
PTPN18-205ENST00000428843 LILRA4P59901 499 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 MCCD1P59942 119 aaPredicted RBP24.08■■□□□ 1.45
PTPN18-205ENST00000428843 RBP5P82980 135 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 CT47A1Q5JQC4 288 aaPredicted RBP24.08■■□□□ 1.45
PTPN18-205ENST00000428843 ADGRD2Q7Z7M1 963 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 CEP57Q86XR8 500 aa24.08■■□□□ 1.45
PTPN18-205ENST00000428843 C2orf71A6NGG8 1288 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 C2CD2LO14523 706 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 IKBKBO14920 756 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 C4BPAP04003 597 aaKnown RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 FGFR3P22607 806 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 TKTP29401 623 aaKnown RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 TAF6P49848 677 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 AP3M2P53677 418 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 DSG1Q02413 1049 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 TYRO3Q06418 890 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 PTPN14Q15678 1187 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 TCEAL5Q5H9L2 206 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 RTP2Q5QGT7 225 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 KIAA0319Q5VV43 1072 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 KIAA1841Q6NSI8 718 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 C11orf57Q6ZUT1 292 aaPredicted RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 MRPL43Q8N983 215 aaKnown RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 ZNF560Q96MR9 790 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 TTPALQ9BTX7 342 aa24.07■■□□□ 1.44
PTPN18-205ENST00000428843 MRPL17Q9NRX2 175 aaKnown RBP24.07■■□□□ 1.44
PTPN18-205ENST00000428843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 LILRB3O75022 631 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 LETM1O95202 739 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 FGFR1OPO95684 399 aaKnown RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 CST3P01034 146 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 PNPLA4P41247 253 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 PPP3CAQ08209 521 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 CCDC40Q4G0X9 1142 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 TDRD10Q5VZ19 366 aaKnown RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 DSTYKQ6XUX3 929 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 FRMD5Q7Z6J6 570 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 LRRC52Q8N7C0 313 aa24.06■■□□□ 1.44
PTPN18-205ENST00000428843 RIN2Q8WYP3 895 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-205ENST00000428843 METTL14Q9HCE5 456 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms