RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 TSHZ1Q6ZSZ6 1077 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 FITM2Q8N6M3 262 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 SUPT20HQ8NEM7 779 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 TMIEQ8NEW7 156 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 CAVIN3Q969G5 261 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 BOD1Q96IK1 185 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 CLPTM1LQ96KA5 538 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 COQ10AQ96MF6 247 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 RNPEPQ9H4A4 650 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 PCDH12Q9NPG4 1184 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 TDP1Q9NUW8 608 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 FOXJ2Q9P0K8 574 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 CTTNBP2NLQ9P2B4 639 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
TIMM9P3-201ENST00000428659 SHTN1A0MZ66 631 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 E9PLN8 166 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 ESRRBO95718 433 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 ELFN1P0C7U0 828 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 HKR1P10072 659 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 HNRNPMP52272 730 aaKnown RBP eCLIP4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 CDC42EP1Q00587 391 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 KHDC1Q4VXA5 237 aaKnown RBP4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 PRR16Q569H4 304 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 SIMC1Q8NDZ2 872 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 IL17RDQ8NFM7 739 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 NUP133Q8WUM0 1156 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 CRAMP1Q96RY5 1269 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 SMAD5Q99717 465 aaKnown RBP4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 VKORC1Q9BQB6 163 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 RIOX1Q9H6W3 641 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 MANSC1Q9H8J5 431 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
TIMM9P3-201ENST00000428659 ZAR1LA6NP61 321 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 NT5C1B-RDH14C9J2C7 533 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 F2RL2O00254 374 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 SLC43A1O75387 559 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 C1QL1O75973 258 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 HLA-DOAP06340 250 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 VAV2P52735 878 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 SIM1P81133 766 aaPredicted RBP4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 TAP1Q03518 808 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 SF3B3Q15393 1217 aaKnown RBP4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 CD300EQ496F6 205 aaPredicted RBP4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 Q6ZNX1 250 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 RSPH3Q86UC2 560 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 NSUN6Q8TEA1 469 aaKnown RBP4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 GALNT9Q9HCQ5 603 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 TESQ9UGI8 421 aaKnown RBP4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 AGAP1Q9UPQ3 857 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 COL4A3BPQ9Y5P4 624 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 NOX1Q9Y5S8 564 aa4.51□□□□□ -1.69
TIMM9P3-201ENST00000428659 KAT6AQ92794 2004 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 SUN1O94901 812 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 RHOBTB3O94955 611 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 CD1AP06126 327 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 FDXRP22570 491 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 PHKA1P46020 1223 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 PABPC1LQ4VXU2 614 aaKnown RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 BRDTQ58F21 947 aaPredicted RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 RNF187Q5TA31 235 aaPredicted RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 PRIMA1Q86XR5 153 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 SSH3Q8TE77 659 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 HDAC10Q969S8 669 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 PTCD3Q96EY7 689 aaKnown RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 PNKPQ96T60 521 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 AIFM2Q9BRQ8 373 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 C1orf43Q9BWL3 253 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 CASS4Q9NQ75 786 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 CDYLQ9Y232 598 aa4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 MTO1Q9Y2Z2 717 aaKnown RBP4.5□□□□□ -1.69
TIMM9P3-201ENST00000428659 VWC2LB2RUY7 222 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 TEX33O43247 280 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 PPFIA4O75335 1185 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 HAUS5O94927 633 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 MATN4O95460 622 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 MALP21145 153 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 LPOP22079 712 aaPredicted RBP4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 CXCR5P32302 372 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 IL12RB1P42701 662 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 CREMQ03060 361 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 MPP3Q13368 585 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 UAP1L1Q3KQV9 507 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 SPDYE7PQ495Y7 208 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 DPY19L2P1Q6NXN4 242 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 FBXO42Q6P3S6 717 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 TMPRSS9Q7Z410 1059 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 CFAP52Q8N1V2 620 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 FAM43AQ8N2R8 423 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 PDPRQ8NCN5 879 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 SLC17A8Q8NDX2 589 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 SLC30A5Q8TAD4 765 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 LPIN2Q92539 896 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 IL17RBQ9NRM6 502 aa4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.49□□□□□ -1.69
TIMM9P3-201ENST00000428659 LRRC3CA6NJW4 275 aa4.48□□□□□ -1.69
TIMM9P3-201ENST00000428659 SGTAO43765 313 aa4.48□□□□□ -1.69
TIMM9P3-201ENST00000428659 ERN1O75460 977 aaKnown RBP4.48□□□□□ -1.69
TIMM9P3-201ENST00000428659 ALAS1P13196 640 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms