RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 FGFR4P22455 802 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 LLGL1Q15334 1064 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 MARCH8Q5T0T0 291 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 MCOLN2Q8IZK6 566 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
HDAC9-210ENST00000428307 CARD9Q9H257 536 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ARF4P18085 180 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-210ENST00000428307 CYP2C19P33261 490 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 GYS2P54840 703 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 GRM1Q13255 1194 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 TCEAL1Q15170 157 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 SURF1Q15526 300 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-210ENST00000428307 AMHR2Q16671 573 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 KIZQ2M2Z5 673 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 KIAA0319LQ8IZA0 1049 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 UBL4BQ8N7F7 174 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 LINC01465Q8N7H1 131 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF606Q8WXB4 792 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-210ENST00000428307 CISHQ9NSE2 258 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 FLRT1Q9NZU1 646 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 UVRAGQ9P2Y5 699 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 ANAPC7Q9UJX3 599 aa11.12□□□□□ -0.63
HDAC9-210ENST00000428307 LACTBL1A8MY62 500 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 B4GALT4O60513 344 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 MTA2O94776 668 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 TNNC2P02585 160 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CYP1A1P04798 512 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 NFICP08651 508 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CYP2B6P20813 491 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 FAM193AP78312 1265 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CCL14Q16627 93 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 ANKRD36BP1Q96IX9 119 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 RPS6KC1Q96S38 1066 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 GDF3Q9NR23 364 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 MIF4GDA9UHW6 222 aaKnown RBP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 ZEB2O60315 1214 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 PYGMP11217 842 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 PEX5P50542 639 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 POU5F1BQ06416 359 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 GPS2Q13227 327 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CASKIN2Q8WXE0 1202 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 XYLT2Q9H1B5 865 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 FAM153AQ9UHL3 310 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 HPCAL4Q9UM19 191 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
HDAC9-210ENST00000428307 CCDC188H7C350 402 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 ERLIN2O94905 339 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 CDH8P55286 799 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 NOMO3P69849 1222 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 CENPCQ03188 943 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 RIN2Q8WYP3 895 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-210ENST00000428307 ERVK-5Q9HDB9 667 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-210ENST00000428307 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 EVPLQ92817 2033 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MYO1FO00160 1098 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 TTI1O43156 1089 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 GJB6O95452 261 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 ITGB3P05106 788 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 BRD2P25440 801 aaKnown RBP11.1□□□□□ -0.63
HDAC9-210ENST00000428307 RAP1GAPP47736 663 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 EPHB4P54760 987 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 HLTFQ14527 1009 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC9-210ENST00000428307 FAM187BQ17R55 369 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 HSP90B2PQ58FF3 399 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MORN1Q5T089 497 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 OLFML2BQ68BL8 750 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 MON1BQ7L1V2 547 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
HDAC9-210ENST00000428307 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms