RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ACOT2P49753 483 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 CTXN3Q4LDR2 81 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 JADE1Q6IE81 842 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 CCDC73Q6ZRK6 1079 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 LINC00301Q8NCQ3 95 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 MFSD1Q9H3U5 465 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 ST6GALNAC4Q9H4F1 302 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 TFIP11Q9UBB9 837 aaKnown RBP20.01■□□□□ 0.79
PSPC1-202ENST00000427943 CPSF3Q9UKF6 684 aaKnown RBP20.01■□□□□ 0.79
PSPC1-202ENST00000427943 PCDHB8Q9UN66 801 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 PPEF2O14830 753 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 TBC1D4O60343 1298 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 NFICP08651 508 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 IDEP14735 1019 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 MRPL58Q14197 206 aaKnown RBP20■□□□□ 0.79
PSPC1-202ENST00000427943 UVSSAQ2YD98 709 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 ADALQ6DHV7 355 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 ZNF280DQ6N043 979 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 ZNF720Q7Z2F6 126 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 ZNF461Q8TAF7 563 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 ITFG1Q8TB96 612 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 MRPL44Q9H9J2 332 aaKnown RBP20■□□□□ 0.79
PSPC1-202ENST00000427943 DNMT3BQ9UBC3 853 aaKnown RBP20■□□□□ 0.79
PSPC1-202ENST00000427943 FBXL21Q9UKT6 434 aa20■□□□□ 0.79
PSPC1-202ENST00000427943 TIMM13Q9Y5L4 95 aaPredicted RBP20■□□□□ 0.79
PSPC1-202ENST00000427943 PRRG1O14668 218 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 XPOTO43592 962 aaKnown RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 PPP1R37O75864 691 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 ABLIM3O94929 683 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 ADRB2P07550 413 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 HSP90AA1P07900 732 aaKnown RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 CFHP08603 1231 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 CYP3A5P20815 502 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 ELF1P32519 619 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 KCNA1Q09470 495 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 HTR4Q13639 388 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 SLC44A3Q8N4M1 653 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 TMEM105Q8N8V8 129 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 APPL2Q8NEU8 664 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 FLCNQ8NFG4 579 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 ING5Q8WYH8 240 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 HVCN1Q96D96 273 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 CYP4F11Q9HBI6 524 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 SEL1LQ9UBV2 794 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 AGO2Q9UKV8 859 aaKnown RBP19.99■□□□□ 0.79
PSPC1-202ENST00000427943 CDH7Q9ULB5 785 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 NUMBLQ9Y6R0 609 aa19.99■□□□□ 0.79
PSPC1-202ENST00000427943 M0QZQ0 153 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 SPTLC2O15270 562 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 GCNT3O95395 438 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 SEC24AO95486 1093 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 LRG1P02750 347 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 POU2F2P09086 479 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 CPB1P15086 417 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 GAP43P17677 238 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 CASP5P51878 434 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 TCF15Q12870 199 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 PABPC1LQ4VXU2 614 aaKnown RBP19.98■□□□□ 0.79
PSPC1-202ENST00000427943 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 CWF19L1Q69YN2 538 aaKnown RBP19.98■□□□□ 0.79
PSPC1-202ENST00000427943 SLFN12LQ6IEE8 588 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 DSTYKQ6XUX3 929 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 SIX5Q8N196 739 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 BEST2Q8NFU1 509 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 POMGNT1Q8WZA1 660 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 FGF13Q92913 245 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 FGFBP2Q9BYJ0 223 aa19.98■□□□□ 0.79
PSPC1-202ENST00000427943 ANHXE9PGG2 379 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 ATF2P15336 505 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 AARSP49588 968 aaKnown RBP eCLIP19.97■□□□□ 0.79
PSPC1-202ENST00000427943 PTPN5P54829 565 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 YWHAHQ04917 246 aaPredicted RBP19.97■□□□□ 0.79
PSPC1-202ENST00000427943 TMEM132DQ14C87 1099 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 CD302Q8IX05 232 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 SPRYD3Q8NCJ5 442 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 FGF14Q92915 247 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 NXPE3Q969Y0 559 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 PRRX2Q99811 253 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 STRA6Q9BX79 667 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 INSL5Q9Y5Q6 135 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.97■□□□□ 0.79
PSPC1-202ENST00000427943 STYXL1Q9Y6J8 313 aa19.97■□□□□ 0.79
PSPC1-202ENST00000427943 MIA3Q5JRA6 1907 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 ARHGEF37A1IGU5 675 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 RHOP08100 348 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 OR4Q2P0C623 313 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 SRFP11831 508 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 ADSSP30520 456 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 ADCY1Q08828 1119 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 SLC5A9Q2M3M2 681 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 L1TD1Q5T7N2 865 aaKnown RBP19.96■□□□□ 0.79
PSPC1-202ENST00000427943 ASTLQ6HA08 431 aaPredicted RBP19.96■□□□□ 0.79
PSPC1-202ENST00000427943 PARM1Q6UWI2 310 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 RNF19BQ6ZMZ0 732 aa19.96■□□□□ 0.79
PSPC1-202ENST00000427943 RTL10Q7L3V2 364 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms