RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CAMK4Q16566 473 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 EP400NLQ6ZTU2 488 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 SUSD3Q96L08 255 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 KLHL5Q96PQ7 755 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 CLSTN2Q9H4D0 955 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 PIRO00625 290 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 PPEF2O14830 753 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 SYN3O14994 580 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 TBX10O75333 385 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 GLP2RO95838 553 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 TMEM191BP0C7N4 346 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 SRGAP2BP0DMP2 458 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 KCNA5P22460 613 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 PAX3P23760 479 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 NR2F2P24468 414 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 TKTP29401 623 aaKnown RBP27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 AARSP49588 968 aaKnown RBP eCLIP27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 NDUFV1P49821 464 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 STIM1Q13586 685 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 KCNC3Q14003 757 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 PPFIBP1Q86W92 1011 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 WDR49Q8IV35 697 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 ADSSL1Q8N142 457 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 MFSD14AQ96MC6 490 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 FNBP1Q96RU3 617 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 MTMR12Q9C0I1 747 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 KIAA1468Q9P260 1216 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 FNIP2Q9P278 1114 aa27.19■■□□□ 1.94
HERPUD2-205ENST00000427455 PTPRJQ12913 1337 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 ADH1AP07327 375 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 RPL13P26373 211 aaKnown RBP27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 LTBRP36941 435 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 PPP1R2P41236 205 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 MORC3Q14149 939 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 PSMD5Q16401 504 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 EDRF1Q3B7T1 1238 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 ISM2Q6H9L7 571 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 PRSS55Q6UWB4 352 aaPredicted RBP27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 VN1R2Q8NFZ6 395 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 ATXN2LQ8WWM7 1075 aaKnown RBP27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 ANKRD36BP1Q96IX9 119 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 CGRRF1Q99675 332 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 INTS13Q9NVM9 706 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 ITGA11Q9UKX5 1188 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 FRMD4BQ9Y2L6 1034 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 HCFC2Q9Y5Z7 792 aa27.18■■□□□ 1.94
HERPUD2-205ENST00000427455 TEX28O15482 410 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 DLATP10515 647 aaKnown RBP27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 KLRC2P26717 231 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 TFF2Q03403 129 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 AAK1Q2M2I8 961 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 LMBRD2Q68DH5 695 aaPredicted RBP27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 LLGL2Q6P1M3 1020 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 TMEM184AQ6ZMB5 413 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 C1orf127Q8N9H9 656 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 TRIML1Q8N9V2 468 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 LNX1Q8TBB1 728 aaPredicted RBP27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 CCDC127Q96BQ5 260 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 PCDHB8Q9UN66 801 aa27.17■■□□□ 1.94
HERPUD2-205ENST00000427455 M0QZQ0 153 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 BIN1O00499 593 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 PSMA7O14818 248 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 TNNC2P02585 160 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 ITGB3P05106 788 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 CASP4P49662 377 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 LILRA4P59901 499 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 RBM10P98175 930 aaKnown RBP27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 DLX2Q07687 328 aaPredicted RBP27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 DUOXA2Q1HG44 320 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 CEP135Q66GS9 1140 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 CENPPQ6IPU0 288 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 ANKS3Q6ZW76 656 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 CASP10Q92851 521 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 ZNF560Q96MR9 790 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 TSG101Q99816 390 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 NUP62CLQ9H1M0 184 aa27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 BARX2Q9UMQ3 279 aaPredicted RBP27.16■■□□□ 1.94
HERPUD2-205ENST00000427455 H3BQ06 376 aaPredicted RBP27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 MAPK13O15264 365 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 TNNI1P19237 187 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 BMP6P22004 513 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 POLR2BP30876 1174 aaKnown RBP27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 PNPLA4P41247 253 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 TAF6P49848 677 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 CLCN4P51793 760 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 MRPS5P82675 430 aaKnown RBP27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 APPL2Q8NEU8 664 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 OR5B17Q8NGF7 314 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 SLC22A17Q8WUG5 538 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 FAM84AQ96KN4 292 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 CLEC1BQ9P126 229 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 MTRRQ9UBK8 725 aa27.15■■□□□ 1.94
HERPUD2-205ENST00000427455 SCN1AP35498 2009 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 LRRC63Q05C16 580 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 ADAM9Q13443 819 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 LEXMQ3ZCV2 418 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 SV2CQ496J9 727 aa27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 VARS2Q5ST30 1063 aaKnown RBP27.14■■□□□ 1.94
HERPUD2-205ENST00000427455 DSTYKQ6XUX3 929 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms