RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 BBS9Q3SYG4 887 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 C6orf118Q5T5N4 469 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 CATSPERGQ6ZRH7 1159 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 SYTL5Q8TDW5 730 aaPredicted RBP14.22□□□□□ -0.13
USP42-203ENST00000426246 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 PITPNM3Q9BZ71 974 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 OLFML3Q9NRN5 406 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 NFS1Q9Y697 457 aa14.22□□□□□ -0.13
USP42-203ENST00000426246 A6NNZ2 444 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 RIPK2O43353 540 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 GRAP2O75791 330 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 KRT1P04264 644 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 POTEJP0CG39 1038 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
USP42-203ENST00000426246 JAM2P57087 298 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 TUBB8Q3ZCM7 444 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 TARS2Q9BW92 718 aaKnown RBP14.21□□□□□ -0.13
USP42-203ENST00000426246 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 E2F8A0AVK6 867 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 DSG3P32926 999 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
USP42-203ENST00000426246 PPP2R5CQ13362 524 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 HHATQ5VTY9 493 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 DUPD1Q68J44 220 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 TRPM8Q7Z2W7 1104 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 CCDC77Q9BR77 488 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 TUFT1Q9NNX1 390 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 KLHL14Q9P2G3 628 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 PFASO15067 1338 aa14.21□□□□□ -0.13
USP42-203ENST00000426246 A0A0G2JND7 137 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 ATP2A1O14983 1001 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 STRN3Q13033 797 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 TKFCQ3LXA3 575 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 CYP4X1Q8N118 509 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.141e-6■■■■□ 21.5
USP42-203ENST00000426246 TMEM206Q9H813 350 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 WDR81Q562E7 1941 aa14.21□□□□□ -0.14
USP42-203ENST00000426246 PDHA1P08559 390 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 TCF4P15884 667 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 DRD4P21917 467 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 TARSP26639 723 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 TMEM132BQ14DG7 1078 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 ZBTB41Q5SVQ8 909 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 EXOC3L1Q86VI1 746 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 DEPTORQ8TB45 409 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 MAP3K20Q9NYL2 800 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 PLS3P13797 630 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 CETN2P41208 172 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 SCARA3Q6AZY7 606 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 LRIG3Q6UXM1 1119 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 PPP1R21Q6ZMI0 780 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 ZC3H18Q86VM9 953 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 HERPUD2Q9BSE4 406 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 FAM129AQ9BZQ8 928 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 IMPG2Q9BZV3 1241 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 SUN1O94901 812 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 FDX1P10109 184 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 FMO1Q01740 532 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 ADCY2Q08462 1091 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 AUHQ13825 339 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 SNRNP48Q6IEG0 339 aaKnown RBP14.2□□□□□ -0.14
USP42-203ENST00000426246 ZDHHC24Q6UX98 284 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 TMEM121Q9BTD3 319 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 NOD2Q9HC29 1040 aa14.2□□□□□ -0.14
USP42-203ENST00000426246 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 DHX15O43143 795 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 KITP10721 976 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 ARSEP51690 589 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 OAZ1P54368 228 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 EIF3BP55884 814 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 RPL7AP62424 266 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 PPP2R5DQ14738 602 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 FASTKD3Q14CZ7 662 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 FAXCQ5TGI0 409 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 SAMD3Q8N6K7 520 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 EMC1Q8N766 993 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 GLIS1Q8NBF1 620 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 NETO2Q8NC67 525 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 HSPH1Q92598 858 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 TMEM59LQ9UK28 342 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 GNA15P30679 374 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 TREML2Q5T2D2 321 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 PCNX4Q63HM2 1172 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 MCF2L2Q86YR7 1114 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 BSNDQ8WZ55 320 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 MCEEQ96PE7 176 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms