RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 BRCC3P46736 316 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 SOX9P48436 509 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 ZNF252P-AS1Q0IIN9 211 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 FOXC1Q12948 553 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 PRPF4BQ13523 1007 aaKnown RBP15.62■□□□□ 0.09
HDAC6-206ENST00000426196 UPP1Q16831 310 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 GLRA4Q5JXX5 417 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 PLA2G2CQ5R387 149 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 TPGS2Q68CL5 300 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 CDCA2Q69YH5 1023 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-206ENST00000426196 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 SLFN12Q8IYM2 578 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 HS6ST3Q8IZP7 471 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 FBXL16Q8N461 479 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
HDAC6-206ENST00000426196 EDEM2Q9BV94 578 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 C2orf40Q9H1Z8 148 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 FZD8Q9H461 694 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 SMOC1Q9H4F8 434 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 C2orf42Q9NWW7 574 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 NCANO14594 1321 aa15.62■□□□□ 0.09
HDAC6-206ENST00000426196 CITO14578 2027 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 NUP210Q8TEM1 1887 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-206ENST00000426196 LOC400499M0QZD8 3231 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 CCDC163A0A0D9SF12 145 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
HDAC6-206ENST00000426196 MOSPD3O75425 235 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 SEC24AO95486 1093 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 GJA1P17302 382 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 IGFBP6P24592 240 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-206ENST00000426196 RARRES1P49788 294 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 TWF1Q12792 350 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 TEAD2Q15562 447 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 NPY5RQ15761 445 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 MAPK6Q16659 721 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 DCAF4L1Q3SXM0 396 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 WDR44Q5JSH3 913 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 HAUS6Q7Z4H7 955 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 C3orf58Q8NDZ4 430 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 PPP1R10Q96QC0 940 aaKnown RBP15.61■□□□□ 0.09
HDAC6-206ENST00000426196 FREM2Q5SZK8 3169 aa15.61■□□□□ 0.09
HDAC6-206ENST00000426196 TTLL13PA6NNM8 815 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 CPLX1O14810 134 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 SYN3O14994 580 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 AKAP3O75969 853 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 PDIA3P30101 505 aaKnown RBP15.6■□□□□ 0.09
HDAC6-206ENST00000426196 EPHA5P54756 1037 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 FCHO2Q0JRZ9 810 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 CCINQ13939 588 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 PON2Q15165 354 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 DAB2IPQ5VWQ8 1189 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 TXNDC11Q6PKC3 985 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 CD300LGQ6UXG3 332 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 MAEAQ7L5Y9 396 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 MCPH1Q8NEM0 835 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 AGXT2Q9BYV1 514 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 GOLGA2P5Q9HBQ8 144 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 GPRC5CQ9NQ84 441 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 CEP72Q9P209 647 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-206ENST00000426196 MAFFQ9ULX9 164 aa15.6■□□□□ 0.09
HDAC6-206ENST00000426196 ASCC3Q8N3C0 2202 aaKnown RBP15.59■□□□□ 0.09
HDAC6-206ENST00000426196 SRRM3A6NNA2 597 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-206ENST00000426196 EXTL3O43909 919 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 LIG1P18858 919 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 HOXC13P31276 330 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 PXNP49023 591 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-206ENST00000426196 APBB1IPQ7Z5R6 666 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-206ENST00000426196 AFF4Q9UHB7 1163 aaKnown RBP15.59■□□□□ 0.09
HDAC6-206ENST00000426196 FBXL5Q9UKA1 691 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 SLC8A2Q9UPR5 921 aa15.59■□□□□ 0.09
HDAC6-206ENST00000426196 SETXQ7Z333 2677 aaKnown RBP15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ACKR2O00590 384 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 DPYSL4O14531 572 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 GIPC1O14908 333 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 SPINK2P20155 84 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ELF2Q15723 593 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 CTXN3Q4LDR2 81 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 EEF1DP3Q658K8 133 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 TCEAL6Q6IPX3 200 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ZNF280DQ6N043 979 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 CPLX2Q6PUV4 134 aaKnown RBP15.58■□□□□ 0.08
HDAC6-206ENST00000426196 LRSAM1Q6UWE0 723 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 TTC8Q8TAM2 541 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 SHKBP1Q8TBC3 707 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 PIGOQ8TEQ8 1089 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ZCCHC14Q8WYQ9 949 aaKnown RBP15.58■□□□□ 0.08
HDAC6-206ENST00000426196 TCEAL3Q969E4 200 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 RSPRY1Q96DX4 576 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 ZC3H10Q96K80 434 aaKnown RBP15.58■□□□□ 0.08
HDAC6-206ENST00000426196 HSD17B14Q9BPX1 270 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 TMEM121BQ9BXQ6 578 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-206ENST00000426196 GTSE1Q9NYZ3 720 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.08
HDAC6-206ENST00000426196 NUB1Q9Y5A7 615 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms