RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 MRPL42Q9Y6G3 142 aaKnown RBP6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PTPRJQ12913 1337 aa6.22□□□□□ -1.41
HERPUD2-204ENST00000426180 PTPRSQ13332 1948 aa6.21□□□□□ -1.41
HERPUD2-204ENST00000426180 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 SMIM28A0A1B0GU29 152 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 TTC26A0AVF1 554 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 F8W810 466 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 INPPL1O15357 1258 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 EXTL3O43909 919 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 EXOC3O60645 756 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 AKAP3O75969 853 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 DDHD2O94830 711 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 POMCP01189 267 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CA3P07451 260 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CLTAP09496 248 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 SKIP12755 728 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 PBX3P40426 434 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CTSOP43234 321 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 RELBQ01201 579 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 SOX4Q06945 474 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 PAK1Q13153 545 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 ADAM9Q13443 819 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 NAB2Q15742 525 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 SKOR2Q2VWA4 1001 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 XKR4Q5GH76 650 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 NOMO2Q5JPE7 1267 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 GLRA4Q5JXX5 417 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 LMBRD2Q68DH5 695 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 C12orf56Q8IXR9 622 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 ZC3H3Q8IXZ2 948 aaKnown RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 EFCAB13Q8IY85 973 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 GPD1LQ8N335 351 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 MLKLQ8NB16 471 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 WHAMMQ8TF30 809 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 PGBD4Q96DM1 585 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 DHTKD1Q96HY7 919 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 ACAP3Q96P50 834 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 INSM2Q96T92 566 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 YME1L1Q96TA2 773 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 POP1Q99575 1024 aaKnown RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 RAD9AQ99638 391 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CCDC94Q9BW85 323 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 TMEM117Q9H0C3 514 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 DNAJC25Q9H1X3 360 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 NKX2-4Q9H2Z4 354 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 GOLGA2P5Q9HBQ8 144 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 TOPORSQ9NS56 1045 aaPredicted RBP6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 TBC1D13Q9NVG8 400 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 DNAJB4Q9UDY4 337 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 FKBPLQ9UIM3 349 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 RWDD2AQ9UIY3 292 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
HERPUD2-204ENST00000426180 CHD9Q3L8U1 2897 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 RANBP2P49792 3224 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PDE4DIPQ5VU43 2346 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 MICAL3Q7RTP6 2002 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 LINC01553A4QN01 128 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 EPOPA6NHQ4 379 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 NT5C1B-RDH14C9J2C7 533 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PSMA7O14818 248 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 PPEF2O14830 753 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 KIF20AO95235 890 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 NFICP08651 508 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 KCNE1P15382 129 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 NR2F2P24468 414 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 IRS1P35568 1242 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC11A1P49279 550 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 MARSP56192 900 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 SNRPFP62306 86 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 DLG4P78352 724 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 TAP1Q03518 808 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CYP24A1Q07973 514 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 STIM1Q13586 685 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 BTG3Q14201 252 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 SNRNP35Q16560 246 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 STX1AQ16623 288 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 NFIL3Q16649 462 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 EDRF1Q3B7T1 1238 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 ANO6Q4KMQ2 910 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 C1orf220Q5T0J3 134 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 JADE1Q6IE81 842 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 SASS6Q6UVJ0 657 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 GLB1LQ6UWU2 654 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CD300LGQ6UXG3 332 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 FAM43BQ6ZT52 329 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 APBB1IPQ7Z5R6 666 aaPredicted RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 IRF2BP1Q8IU81 584 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 BRSK2Q8IWQ3 736 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 CMTR2Q8IYT2 770 aaKnown RBP6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 OR5B17Q8NGF7 314 aa6.2□□□□□ -1.42
HERPUD2-204ENST00000426180 GOLGA5Q8TBA6 731 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms