RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 KIF12Q96FN5 646 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 ZMAT2Q96NC0 199 aaKnown RBP18.61■□□□□ 0.57
FN1-208ENST00000426059 ASB7Q9H672 318 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 TRMT13Q9NUP7 481 aaKnown RBP18.61■□□□□ 0.57
FN1-208ENST00000426059 KLK14Q9P0G3 267 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 CHRNA1P02708 482 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 FTLP02792 175 aaPredicted RBP18.61■□□□□ 0.57
FN1-208ENST00000426059 RAP1GAPP47736 663 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 AMPD2Q01433 879 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 NFX1Q12986 1120 aaKnown RBP18.61■□□□□ 0.57
FN1-208ENST00000426059 PTGISQ16647 500 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 WDR72Q3MJ13 1102 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 SERINC5Q86VE9 423 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 OSGEPQ9NPF4 335 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 TRIM17Q9Y577 477 aa18.61■□□□□ 0.57
FN1-208ENST00000426059 FTCDO95954 541 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 CST5P28325 142 aaPredicted RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 POLR2BP30876 1174 aaKnown RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 DNA2P51530 1060 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 ACLYP53396 1101 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 CDR2Q01850 454 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 RNF180Q86T96 592 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 RNF10Q8N5U6 811 aaKnown RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 PCSK9Q8NBP7 692 aaKnown RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 RBBP8NLQ8NC74 664 aaPredicted RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 CXorf38Q8TB03 319 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 ALS2CR12Q96Q35 445 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 PUF60Q9UHX1 559 aaKnown RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 PACSIN2Q9UNF0 486 aaPredicted RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 M0QZ92 97 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 ZNF185O15231 689 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 RECQL4O94761 1208 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 TBXAS1P24557 533 aaPredicted RBP18.6■□□□□ 0.57
FN1-208ENST00000426059 GRK4P32298 578 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 THPOP40225 353 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 CDH8P55286 799 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 ITGA7Q13683 1181 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 GLIPR1L2Q4G1C9 344 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 UBXN11Q5T124 520 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 NIF3L1Q9GZT8 377 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 CDC23Q9UJX2 597 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 AGAP1Q9UPQ3 857 aa18.6■□□□□ 0.57
FN1-208ENST00000426059 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 CTIFO43310 598 aaKnown RBP18.59■□□□□ 0.57
FN1-208ENST00000426059 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
FN1-208ENST00000426059 ASPAP45381 313 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 LHX8Q68G74 356 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 FAM81BQ96LP2 452 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 CISHQ9NSE2 258 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 CXCR5P32302 372 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 KYAT1Q16773 422 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 TWF2Q6IBS0 349 aaKnown RBP18.59■□□□□ 0.57
FN1-208ENST00000426059 PASD1Q8IV76 773 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 SLC35G2Q8TBE7 412 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 C18orf25Q96B23 403 aaPredicted RBP18.59■□□□□ 0.57
FN1-208ENST00000426059 CAPZA3Q96KX2 299 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
FN1-208ENST00000426059 DPP3Q9NY33 737 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 PARP2Q9UGN5 583 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 JRKLQ9Y4A0 524 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 PCDHB2Q9Y5E7 798 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 TRPV2Q9Y5S1 764 aa18.59■□□□□ 0.57
FN1-208ENST00000426059 GNA15P30679 374 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 ORC1Q13415 861 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 C2CD6Q53TS8 623 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 MNS1Q8NEH6 495 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 CTNNBL1Q8WYA6 563 aaPredicted RBP18.58■□□□□ 0.56
FN1-208ENST00000426059 SNX27Q96L92 541 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 ISCUQ9H1K1 167 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 TUBGCP4Q9UGJ1 667 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 ST3GAL5Q9UNP4 418 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 SAR1BQ9Y6B6 198 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 SCN1AP35498 2009 aa18.58■□□□□ 0.56
FN1-208ENST00000426059 PPEF2O14830 753 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 RPS6KA5O75582 802 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 GNRH1P01148 92 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 AXLP30530 894 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 YARSP54577 528 aaKnown RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 PCBP1Q15365 356 aaKnown RBP eCLIP18.57■□□□□ 0.561e-61■□□□□ 8.9
FN1-208ENST00000426059 PAPD7Q5XG87 772 aaKnown RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 RSPH3Q86UC2 560 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 UBR7Q8N806 425 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 CPA5Q8WXQ8 436 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 SENP6Q9GZR1 1112 aaPredicted RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 SDCBP2Q9H190 292 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 ANKRD62A6NC57 917 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 MEIS3P2A8K0S8 358 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 RTN2O75298 545 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 TMEM253P0C7T8 217 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 IBSPP21815 317 aaPredicted RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 ARRDC4Q8NCT1 418 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 SMG8Q8ND04 991 aaKnown RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 SMYD3Q9H7B4 428 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 AGO3Q9H9G7 860 aaKnown RBP18.57■□□□□ 0.56
FN1-208ENST00000426059 INTUQ9ULD6 942 aa18.57■□□□□ 0.56
FN1-208ENST00000426059 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms