RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 GPM6BQ13491 265 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 NAB2Q15742 525 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 ZCWPW2Q504Y3 356 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 LRRC55Q6ZSA7 311 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 COLGALT2Q8IYK4 626 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 XXYLT1Q8NBI6 393 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 GDPD5Q8WTR4 605 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 HPS3Q969F9 1004 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 SYAP1Q96A49 352 aaPredicted RBP9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 MRPL38Q96DV4 380 aaKnown RBP9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 IGSF21Q96ID5 467 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 TSG101Q99816 390 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 CBWD1Q9BRT8 395 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 MKNK1Q9BUB5 465 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 RBAKQ9NYW8 714 aaPredicted RBP9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 PUF60Q9UHX1 559 aaKnown RBP9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 SSX2IPQ9Y2D8 614 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 PLXNA3P51805 1871 aa9.72□□□□□ -0.85
TPM3P4-201ENST00000425942 SPTBN5Q9NRC6 3674 aaKnown RBP9.71□□□□□ -0.85
TPM3P4-201ENST00000425942 SMIM28A0A1B0GU29 152 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 BICDL2A1A5D9 508 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 ZNF233A6NK53 670 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 SLC16A3O15427 465 aaKnown RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 FGF18O76093 207 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 GALTP07902 379 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 FOSL2P15408 326 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 LRPAP1P30533 357 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 HOXD13P35453 343 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 OSTNP61366 133 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 GRIN2CQ14957 1233 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 TMEM132DQ14C87 1099 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 SNRNP35Q16560 246 aaKnown RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 SLC10A6Q3KNW5 377 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 PDXDC1Q6P996 788 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 DDX53Q86TM3 631 aaKnown RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 WDR49Q8IV35 697 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 NELFCDQ8IXH7 590 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 KLHL23Q8NBE8 558 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 BEST2Q8NFU1 509 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 DHTKD1Q96HY7 919 aaPredicted RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 ZNF560Q96MR9 790 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 HERC2P3Q9BVR0 1158 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 COLEC11Q9BWP8 271 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 NGRNQ9NPE2 291 aaKnown RBP9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 TLR9Q9NR96 1032 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 MAN1B1Q9UKM7 699 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 ADAM28Q9UKQ2 775 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 USP20Q9Y2K6 914 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 FAN1Q9Y2M0 1017 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 IRAK3Q9Y616 596 aa9.71□□□□□ -0.86
TPM3P4-201ENST00000425942 DENND4AQ7Z401 1863 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 EYSQ5T1H1 3165 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 TISP43B9A030 160 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 NRP1O14786 923 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 TRAPPC3O43617 180 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 EXOC3O60645 756 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 LPXNO60711 386 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 DDHD2O94830 711 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 NR3C1P04150 777 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 SOD2P04179 222 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 ALDH2P05091 517 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 ITGB1P05556 798 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 NR2F2P24468 414 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 MCM4P33991 863 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 TNFSF9P41273 254 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 OR1G1P47890 313 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 SLC11A1P49279 550 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 ACOT2P49753 483 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 AP3M2P53677 418 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 SH3BP2P78314 561 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 MORC3Q14149 939 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 SMC1AQ14683 1233 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 QPCTQ16769 361 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 UPP1Q16831 310 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CT47A1Q5JQC4 288 aaPredicted RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 GLRA4Q5JXX5 417 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CCDC183Q5T5S1 534 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CENPPQ6IPU0 288 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CRELD2Q6UXH1 353 aaPredicted RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 RBM43Q6ZSC3 357 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 INTS8Q75QN2 995 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 ZC3H3Q8IXZ2 948 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 ADSSL1Q8N142 457 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CACTINQ8WUQ7 758 aaKnown RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 CDX2Q99626 313 aaPredicted RBP9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 FAM213AQ9BRX8 229 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 PRDM12Q9H4Q4 367 aa9.7□□□□□ -0.86
TPM3P4-201ENST00000425942 NSUN3Q9H649 340 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms