RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 SF3B1O75533 1304 aaKnown RBP eCLIP22.26■■□□□ 1.151e-7■■■■■ 172.3
PMS1-211ENST00000424766 CCDC192P0DO97 292 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 IGFBP6P24592 240 aaPredicted RBP22.25■■□□□ 1.15
PMS1-211ENST00000424766 DLG4P78352 724 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 RBP5P82980 135 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 TPD52L1Q16890 204 aaPredicted RBP22.25■■□□□ 1.15
PMS1-211ENST00000424766 C1orf220Q5T0J3 134 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 TRAPPC11Q7Z392 1133 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 VPS52Q8N1B4 723 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 TMEM130Q8N3G9 435 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 CXorf38Q8TB03 319 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 HASPINQ8TF76 798 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 GUCD1Q96NT3 240 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 VN1R3Q9BXE9 311 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 TLR9Q9NR96 1032 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 NUB1Q9Y5A7 615 aa22.25■■□□□ 1.15
PMS1-211ENST00000424766 ATG2AQ2TAZ0 1938 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 C4BPAP04003 597 aaKnown RBP22.24■■□□□ 1.15
PMS1-211ENST00000424766 SOD2P04179 222 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 ITGB3P05106 788 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 GTF2H1P32780 548 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 PNPLA4P41247 253 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 MARSP56192 900 aaKnown RBP22.24■■□□□ 1.15
PMS1-211ENST00000424766 LILRA4P59901 499 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 ERVFC1P60507 584 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 ADGRE1Q14246 886 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 USP41Q3LFD5 358 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 CCDC40Q4G0X9 1142 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 GPR65Q8IYL9 337 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 ENOX1Q8TC92 643 aaKnown RBP22.24■■□□□ 1.15
PMS1-211ENST00000424766 HERC2P3Q9BVR0 1158 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 NGRNQ9NPE2 291 aaKnown RBP22.24■■□□□ 1.15
PMS1-211ENST00000424766 SIX4Q9UIU6 781 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 AGAP1Q9UPQ3 857 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 R3HCC1Q9Y3T6 440 aaKnown RBP22.24■■□□□ 1.15
PMS1-211ENST00000424766 CHD7Q9P2D1 2997 aa22.24■■□□□ 1.15
PMS1-211ENST00000424766 SYCE3A1L190 88 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 PPEF2O14830 753 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 FSCN2O14926 492 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 STX10O60499 249 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 CTSAP10619 480 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 AARSP49588 968 aaKnown RBP eCLIP22.23■■□□□ 1.15
PMS1-211ENST00000424766 C11orf57Q6ZUT1 292 aaPredicted RBP22.23■■□□□ 1.15
PMS1-211ENST00000424766 TAS1R1Q7RTX1 841 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 TMC7Q7Z402 723 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 LRRC52Q8N7C0 313 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 MICAL1Q8TDZ2 1067 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 MYLIPQ8WY64 445 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 FAM84AQ96KN4 292 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 SUSD3Q96L08 255 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 ZNF560Q96MR9 790 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 FUCA2Q9BTY2 467 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 NAT10Q9H0A0 1025 aaKnown RBP22.23■■□□□ 1.15
PMS1-211ENST00000424766 ZBP1Q9H171 429 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 THAP9Q9H5L6 903 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 CHST7Q9NS84 486 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 SSX2IPQ9Y2D8 614 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 MTCH2Q9Y6C9 303 aa22.23■■□□□ 1.15
PMS1-211ENST00000424766 VWA8A3KMH1 1905 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 PHACTR2O75167 634 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 CXCL14O95715 111 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 KRT19P08727 400 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 POLR2BP30876 1174 aaKnown RBP22.22■■□□□ 1.15
PMS1-211ENST00000424766 BRCC3P46736 316 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 TAF6P49848 677 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 ZSCAN23Q3MJ62 389 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 ZACNQ401N2 412 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 TIGD5Q53EQ6 642 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 FAM171A1Q5VUB5 890 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 DNAJC25Q9H1X3 360 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 IRAK3Q9Y616 596 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 MYO7AQ13402 2215 aa22.22■■□□□ 1.15
PMS1-211ENST00000424766 M0QZQ0 153 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 CST3P01034 146 aaPredicted RBP22.21■■□□□ 1.15
PMS1-211ENST00000424766 TRIM49P0CI25 452 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 TRIM49CP0CI26 452 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 FGFR3P22607 806 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 IGFBP4P22692 258 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 DSG1Q02413 1049 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 PPP3CAQ08209 521 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 SMC1AQ14683 1233 aaKnown RBP22.21■■□□□ 1.15
PMS1-211ENST00000424766 SV2CQ496J9 727 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 KIAA0319Q5VV43 1072 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 TDRD10Q5VZ19 366 aaKnown RBP22.21■■□□□ 1.15
PMS1-211ENST00000424766 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.21■■□□□ 1.15
PMS1-211ENST00000424766 C15orf39Q6ZRI6 1047 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 SV2AQ7L0J3 742 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 IRF2BP1Q8IU81 584 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 MRPL43Q8N983 215 aaKnown RBP22.21■■□□□ 1.15
PMS1-211ENST00000424766 TCF25Q9BQ70 676 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 TTPALQ9BTX7 342 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 ENTPD7Q9NQZ7 604 aa22.21■■□□□ 1.15
PMS1-211ENST00000424766 ARHGEF37A1IGU5 675 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 SYN3O14994 580 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 URODP06132 367 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 IRS1P35568 1242 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 GLUD2P49448 558 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 MYO1EQ12965 1108 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 BIRC3Q13489 604 aa22.2■■□□□ 1.14
PMS1-211ENST00000424766 TRPC3Q13507 836 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms