RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 EFCAB13Q8IY85 973 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 RNF168Q8IYW5 571 aaPredicted RBP11□□□□□ -0.65
NCSTN-204ENST00000424645 POF1BQ8WVV4 589 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 TAF4BQ92750 862 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 CCDC127Q96BQ5 260 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 MRPL38Q96DV4 380 aaKnown RBP11□□□□□ -0.65
NCSTN-204ENST00000424645 SRRTQ9BXP5 876 aaKnown RBP11□□□□□ -0.65
NCSTN-204ENST00000424645 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
NCSTN-204ENST00000424645 TLR9Q9NR96 1032 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11□□□□□ -0.65
NCSTN-204ENST00000424645 DSEQ9UL01 958 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 NUB1Q9Y5A7 615 aa11□□□□□ -0.65
NCSTN-204ENST00000424645 RANBP2P49792 3224 aaKnown RBP11□□□□□ -0.65
NCSTN-204ENST00000424645 CITO14578 2027 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 SMTNL1A8MU46 457 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CTSAP10619 480 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TAF6P49848 677 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 LILRA4P59901 499 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 SOX4Q06945 474 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CETN1Q12798 172 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 SMC1AQ14683 1233 aaKnown RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 GRIN2CQ14957 1233 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 ZACNQ401N2 412 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CCDC40Q4G0X9 1142 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TIGD5Q53EQ6 642 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 IER5LQ5T953 404 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 KRT39Q6A163 491 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 FUT10Q6P4F1 479 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TRAPPC11Q7Z392 1133 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 DEFB123Q8N688 67 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 C1orf127Q8N9H9 656 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 ZSWIM2Q8NEG5 633 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 APPL2Q8NEU8 664 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 C18orf25Q96B23 403 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 SUSD3Q96L08 255 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CDCA3Q99618 268 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 HERC2P3Q9BVR0 1158 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CXCL16Q9H2A7 254 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TMEM8AQ9HCN3 771 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 MRPL17Q9NRX2 175 aaKnown RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 CHST7Q9NS84 486 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 MARCH5Q9NX47 278 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 MAGEC2Q9UBF1 373 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 TUBGCP4Q9UGJ1 667 aa10.99□□□□□ -0.65
NCSTN-204ENST00000424645 PRG3Q9Y2Y8 225 aaPredicted RBP10.99□□□□□ -0.65
NCSTN-204ENST00000424645 GBF1Q92538 1859 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TDRD15B5MCY1 1934 aaKnown RBP10.98□□□□□ -0.65
NCSTN-204ENST00000424645 LRRIQ3A6PVS8 624 aaPredicted RBP10.98□□□□□ -0.65
NCSTN-204ENST00000424645 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 NT5C1B-RDH14C9J2C7 533 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 M0QZQ0 153 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 FSCN2O14926 492 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 B4GALT3O60512 393 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 PHACTR2O75167 634 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 KIF4AO95239 1232 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 ITGB3P05106 788 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 P4HA1P13674 534 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TYMPP19971 482 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 FGFR3P22607 806 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
NCSTN-204ENST00000424645 STX17P56962 302 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 MYL5Q02045 173 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 DSG1Q02413 1049 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 SPAG1Q07617 926 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TRPC3Q13507 836 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 ZSCAN23Q3MJ62 389 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 KIAA1841Q6NSI8 718 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 C15orf39Q6ZRI6 1047 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 ANKS3Q6ZW76 656 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TMC7Q7Z402 723 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 VPS52Q8N1B4 723 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TMEM86AQ8N2M4 240 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 MRPL43Q8N983 215 aaKnown RBP10.98□□□□□ -0.65
NCSTN-204ENST00000424645 CCDC150Q8NCX0 1101 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TTPALQ9BTX7 342 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 FUCA2Q9BTY2 467 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 EMILIN2Q9BXX0 1053 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 MTMR12Q9C0I1 747 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 ZBP1Q9H171 429 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 MTMR10Q9NXD2 777 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 GDAP2Q9NXN4 497 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 FNIP2Q9P278 1114 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 DPP7Q9UHL4 492 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 MTUS1Q9ULD2 1270 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 PCDHB8Q9UN66 801 aa10.98□□□□□ -0.65
NCSTN-204ENST00000424645 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
NCSTN-204ENST00000424645 H7C4K7 107 aa10.97□□□□□ -0.65
NCSTN-204ENST00000424645 GRM6O15303 877 aa10.97□□□□□ -0.65
NCSTN-204ENST00000424645 CYP11A1P05108 521 aa10.97□□□□□ -0.65
NCSTN-204ENST00000424645 URODP06132 367 aa10.97□□□□□ -0.65
NCSTN-204ENST00000424645 TPM2P07951 284 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms