RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 TBX20Q9UMR3 447 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 M0QZQ0 153 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 AARSP49588 968 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDR1-234ENST00000424544 GTF2BQ00403 316 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
DDR1-234ENST00000424544 KARSQ15046 597 aaKnown RBP17.62■□□□□ 0.41
DDR1-234ENST00000424544 TPGS2Q68CL5 300 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 GPBP1Q86WP2 473 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 RAD54LQ92698 747 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 TSPAN18Q96SJ8 248 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 ANKFY1Q9P2R3 1169 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 FBXL5Q9UKA1 691 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 FBXL21Q9UKT6 434 aa17.62■□□□□ 0.41
DDR1-234ENST00000424544 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
DDR1-234ENST00000424544 A0A0B4J269 797 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 OAZ2O95190 189 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 SEC24AO95486 1093 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 CXCL8P10145 99 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 PLCG1P19174 1290 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 GPC5P78333 572 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 MCM6Q14566 821 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 SLC39A4Q6P5W5 647 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 DTWD2Q8NBA8 298 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 ST13P5Q8NFI4 369 aaPredicted RBP17.61■□□□□ 0.41
DDR1-234ENST00000424544 DDX12PQ92771 950 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 USP28Q96RU2 1077 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 ST6GALNAC4Q9H4F1 302 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 PARVGQ9HBI0 331 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 DLGAP2Q9P1A6 1054 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 TUBGCP4Q9UGJ1 667 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 MAFFQ9ULX9 164 aa17.61■□□□□ 0.41
DDR1-234ENST00000424544 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
DDR1-234ENST00000424544 LACTBL1A8MY62 500 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 H7C4K7 107 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 TRAK2O60296 914 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 HARSP12081 509 aaKnown RBP17.6■□□□□ 0.41
DDR1-234ENST00000424544 TNFSF9P41273 254 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 STARD6P59095 220 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 KRT85P78386 507 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
DDR1-234ENST00000424544 KYAT1Q16773 422 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 SLC5A9Q2M3M2 681 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 PABPC1LQ4VXU2 614 aaKnown RBP17.6■□□□□ 0.41
DDR1-234ENST00000424544 ZBTB41Q5SVQ8 909 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 MYCT1Q8N699 235 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 BEST2Q8NFU1 509 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 EPSTI1Q96J88 318 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 DDX23Q9BUQ8 820 aaKnown RBP17.6■□□□□ 0.41
DDR1-234ENST00000424544 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 POLIQ9UNA4 740 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 NUB1Q9Y5A7 615 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 CLIC4Q9Y696 253 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 STYXL1Q9Y6J8 313 aa17.6■□□□□ 0.41
DDR1-234ENST00000424544 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
DDR1-234ENST00000424544 FAM186AA6NE01 2351 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 OGTO15294 1046 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 MICAL2O94851 1124 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 RHOP08100 348 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 PTPN2P17706 415 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 SPAG1Q07617 926 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 LARP4BQ92615 738 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 CHAMP1Q96JM3 812 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 STRA6Q9BX79 667 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 GDE1Q9NZC3 331 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 AFF4Q9UHB7 1163 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 FBXO2Q9UK22 296 aaPredicted RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 CA14Q9ULX7 337 aa17.59■□□□□ 0.41
DDR1-234ENST00000424544 UBQLN1Q9UMX0 589 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
DDR1-234ENST00000424544 FAM13AO94988 1023 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 VNN2O95498 520 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 NASPP49321 788 aaPredicted RBP17.58■□□□□ 0.4
DDR1-234ENST00000424544 LIG4P49917 911 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
DDR1-234ENST00000424544 CTXN3Q4LDR2 81 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 SPATA1Q5VX52 437 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 CLEC17AQ6ZS10 378 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 MTSS1LQ765P7 747 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 ZNF720Q7Z2F6 126 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 MAP4K3Q8IVH8 894 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 ARHGEF3Q9NR81 526 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 RCOR1Q9UKL0 485 aa17.58■□□□□ 0.4
DDR1-234ENST00000424544 MRPS23Q9Y3D9 190 aaKnown RBP17.58■□□□□ 0.4
DDR1-234ENST00000424544 CACNA1IQ9P0X4 2223 aa17.57■□□□□ 0.4
DDR1-234ENST00000424544 ANKRD63C9JTQ0 380 aa17.57■□□□□ 0.4
DDR1-234ENST00000424544 NRG2O14511 850 aaPredicted RBP17.57■□□□□ 0.4
DDR1-234ENST00000424544 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
DDR1-234ENST00000424544 GFRA3O60609 400 aa17.57■□□□□ 0.4
DDR1-234ENST00000424544 ECI2O75521 394 aa17.57■□□□□ 0.4
DDR1-234ENST00000424544 PPP1R37O75864 691 aa17.57■□□□□ 0.4
DDR1-234ENST00000424544 YEATS4O95619 227 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms