RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 ITGB3P05106 788 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 URODP06132 367 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 TNNI1P19237 187 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 PTMSP20962 102 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 GLUD2P49448 558 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 STX17P56962 302 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 NLRP12P59046 1061 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 PTPN14Q15678 1187 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 CCDC85BQ15834 202 aaPredicted RBP23.42■■□□□ 1.34
SEC22C-207ENST00000423701 DUOXA2Q1HG44 320 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 USP41Q3LFD5 358 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 TCEAL5Q5H9L2 206 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 FAM171A1Q5VUB5 890 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 CAVIN1Q6NZI2 390 aaKnown RBP23.42■■□□□ 1.34
SEC22C-207ENST00000423701 MRPL43Q8N983 215 aaKnown RBP23.42■■□□□ 1.34
SEC22C-207ENST00000423701 MAFAQ8NHW3 353 aaPredicted RBP23.42■■□□□ 1.34
SEC22C-207ENST00000423701 CXorf38Q8TB03 319 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 MKNK1Q9BUB5 465 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 ITGA11Q9UKX5 1188 aa23.42■■□□□ 1.34
SEC22C-207ENST00000423701 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 C2orf71A6NGG8 1288 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 LRRIQ3A6PVS8 624 aaPredicted RBP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 TRAPPC3O43617 180 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 CXCL14O95715 111 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 TNNC2P02585 160 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 POLR2BP30876 1174 aaKnown RBP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 CA8P35219 290 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 AARSP49588 968 aaKnown RBP eCLIP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 DLG4P78352 724 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 CLDN10P78369 228 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 DSG1Q02413 1049 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 BMS1Q14692 1282 aaKnown RBP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 KLHL40Q2TBA0 621 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 RTP2Q5QGT7 225 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 INTS8Q75QN2 995 aaKnown RBP23.41■■□□□ 1.34
SEC22C-207ENST00000423701 TMC2Q8TDI7 906 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 SIX4Q9UIU6 781 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 IRAK3Q9Y616 596 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 VWA8A3KMH1 1905 aa23.41■■□□□ 1.34
SEC22C-207ENST00000423701 C2CD2LO14523 706 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 EPB41P11171 864 aaKnown RBP23.4■■□□□ 1.34
SEC22C-207ENST00000423701 LILRA4P59901 499 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 KIAA0319Q5VV43 1072 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 SCARA3Q6AZY7 606 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 KIAA1841Q6NSI8 718 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-207ENST00000423701 PPM1EQ8WY54 764 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 ZNF516Q92618 1163 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 SUSD3Q96L08 255 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 MRPL17Q9NRX2 175 aaKnown RBP23.4■■□□□ 1.34
SEC22C-207ENST00000423701 RWDD2AQ9UIY3 292 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 COL6A3P12111 3177 aa23.4■■□□□ 1.34
SEC22C-207ENST00000423701 SPTLC1O15269 473 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 SLC16A3O15427 465 aaKnown RBP23.39■■□□□ 1.34
SEC22C-207ENST00000423701 FGFR3P22607 806 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 VAMP7P51809 220 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 BFSP1Q12934 665 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 TRAPPC11Q7Z392 1133 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 CEP57Q86XR8 500 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 CSGALNACT2Q8N6G5 542 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 PPP2R3CQ969Q6 453 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 SYAP1Q96A49 352 aaPredicted RBP23.39■■□□□ 1.34
SEC22C-207ENST00000423701 BORCS6Q96GS4 357 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 CEP63Q96MT8 703 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 MED15Q96RN5 788 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 TTPALQ9BTX7 342 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 AGAP1Q9UPQ3 857 aa23.39■■□□□ 1.34
SEC22C-207ENST00000423701 MYO7AQ13402 2215 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 LILRB3O75022 631 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 KRT19P08727 400 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 KRT13P13646 458 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 TKTP29401 623 aaKnown RBP23.38■■□□□ 1.33
SEC22C-207ENST00000423701 HYAL1Q12794 435 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 C1orf220Q5T0J3 134 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 RBM23Q86U06 439 aaKnown RBP23.38■■□□□ 1.33
SEC22C-207ENST00000423701 RIN2Q8WYP3 895 aaPredicted RBP23.38■■□□□ 1.33
SEC22C-207ENST00000423701 ZNF560Q96MR9 790 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 SCN1AP35498 2009 aa23.38■■□□□ 1.33
SEC22C-207ENST00000423701 PER2O15055 1255 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 TRIM49P0CI25 452 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 TRIM49CP0CI26 452 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.33
SEC22C-207ENST00000423701 NRIP1P48552 1158 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 TAF6P49848 677 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 RBP5P82980 135 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 ENPEPQ07075 957 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 PRSS55Q6UWB4 352 aaPredicted RBP23.37■■□□□ 1.33
SEC22C-207ENST00000423701 USP37Q86T82 979 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 GPR65Q8IYL9 337 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 LRRC52Q8N7C0 313 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 TLE6Q9H808 572 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 DACH1Q9UI36 760 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 SSX2IPQ9Y2D8 614 aa23.37■■□□□ 1.33
SEC22C-207ENST00000423701 M0QZQ0 153 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 SYN3O14994 580 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 PAX3P23760 479 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 PNPLA4P41247 253 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 AP3M2P53677 418 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 TDRD10Q5VZ19 366 aaKnown RBP23.36■■□□□ 1.33
SEC22C-207ENST00000423701 SASS6Q6UVJ0 657 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms