RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 PLCG1P19174 1290 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 TNFSF9P41273 254 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 LIG4P49917 911 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 PPP2R3AQ06190 1150 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 SPAG1Q07617 926 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 TPGS2Q68CL5 300 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 BRAPQ7Z569 592 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 TMEM130Q8N3G9 435 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 PJA1Q8NG27 643 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 RASSF8Q8NHQ8 419 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 DDX12PQ92771 950 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 MCRS1Q96EZ8 462 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 KIF12Q96FN5 646 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 SHDQ96IW2 340 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 FOXQ1Q9C009 403 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 PLEKHA5Q9HAU0 1116 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 AVENQ9NQS1 362 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-206ENST00000423161 PCDHB8Q9UN66 801 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 INSL5Q9Y5Q6 135 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 TCHHQ07283 1943 aa20.14■□□□□ 0.81
SREBF1-206ENST00000423161 HNRNPDLO14979 420 aaKnown RBP20.13■□□□□ 0.81
SREBF1-206ENST00000423161 SEC24AO95486 1093 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 CEBPBP17676 345 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 LONP1P36776 959 aaKnown RBP20.13■□□□□ 0.81
SREBF1-206ENST00000423161 STARD6P59095 220 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 SNW1Q13573 536 aaKnown RBP20.13■□□□□ 0.81
SREBF1-206ENST00000423161 MCM6Q14566 821 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 MYCT1Q8N699 235 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 KCNN1Q92952 543 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 CORO1BQ9BR76 489 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 PARVGQ9HBI0 331 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 BLOC1S4Q9NUP1 217 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 GDE1Q9NZC3 331 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 DLGAP2Q9P1A6 1054 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 TBX20Q9UMR3 447 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 UBQLN1Q9UMX0 589 aaKnown RBP20.13■□□□□ 0.81
SREBF1-206ENST00000423161 TSC2P49815 1807 aa20.13■□□□□ 0.81
SREBF1-206ENST00000423161 KRT18P05783 430 aaKnown RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 CPB1P15086 417 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 SCP2P22307 547 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 MARCKSP29966 332 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 LRPAP1P30533 357 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 ZNF131P52739 623 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 PFKPQ01813 784 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 GRIN1Q05586 938 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 KARSQ15046 597 aaKnown RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 SF3A1Q15459 793 aaKnown RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 MLF2Q15773 248 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 KYAT1Q16773 422 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 RAD54LQ92698 747 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-206ENST00000423161 SPTBN4Q9H254 2564 aa20.12■□□□□ 0.81
SREBF1-206ENST00000423161 SCN1AP35498 2009 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 LACTBL1A8MY62 500 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 M0QZQ0 153 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 OGTO15294 1046 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 XPOTO43592 962 aaKnown RBP20.11■□□□□ 0.81
SREBF1-206ENST00000423161 TRAK2O60296 914 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ECI2O75521 394 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 PIGRP01833 764 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 PRKCQQ04759 706 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ADCY1Q08828 1119 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ZBTB6Q15916 424 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 SLC44A4Q53GD3 710 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 PRSS36Q5K4E3 855 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ZBTB41Q5SVQ8 909 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ELMOD1Q8N336 334 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 TCEAL4Q96EI5 215 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 ZHX3Q9H4I2 956 aa20.11■□□□□ 0.81
SREBF1-206ENST00000423161 RPF1Q9H9Y2 349 aaKnown RBP20.11■□□□□ 0.81
SREBF1-206ENST00000423161 AFF4Q9UHB7 1163 aaKnown RBP20.11■□□□□ 0.81
SREBF1-206ENST00000423161 TICRRQ7Z2Z1 1910 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 KANSL1LA0AUZ9 987 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 VPS37CA5D8V6 355 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 ZNF197O14709 1029 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 FAM189A1O60320 539 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 LRRN2O75325 713 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 GLULP15104 373 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 CYP3A5P20815 502 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 GUCY2FP51841 1108 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 YWHAHQ04917 246 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 ENOX2Q16206 610 aaKnown RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 POTEHQ6S545 545 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 RNF19BQ6ZMZ0 732 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 PDZD4Q76G19 769 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 LARP4BQ92615 738 aaKnown RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 DDX23Q9BUQ8 820 aaKnown RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 MAFFQ9ULX9 164 aa20.1■□□□□ 0.81
SREBF1-206ENST00000423161 TIMM13Q9Y5L4 95 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-206ENST00000423161 AARSP49588 968 aaKnown RBP eCLIP20.09■□□□□ 0.814e-6■■■□□ 17.5
SREBF1-206ENST00000423161 TWF1Q12792 350 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 UBXN2BQ14CS0 331 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 TANGO2Q6ICL3 276 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 IQCEQ6IPM2 695 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 C1orf210Q8IVY1 113 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 MSTO1Q9BUK6 570 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 PLA2G2FQ9BZM2 168 aa20.09■□□□□ 0.81
SREBF1-206ENST00000423161 GVINP1Q7Z2Y8 2422 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms