RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 INTS13Q9NVM9 706 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 ANO10Q9NW15 660 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 DPP3Q9NY33 737 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 PUF60Q9UHX1 559 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 SYCE3A1L190 88 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 LRRIQ3A6PVS8 624 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 MAPK13O15264 365 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 TMEM191BP0C7N4 346 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 BMP1P13497 986 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 KRT13P13646 458 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 IGFBP4P22692 258 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ERCC5P28715 1186 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ERVFC1P60507 584 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CLDN10P78369 228 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CAMK1Q14012 370 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 STX1AQ16623 288 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CT47A1Q5JQC4 288 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 C1orf220Q5T0J3 134 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 FOXR2Q6PJQ5 311 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 INTS8Q75QN2 995 aaKnown RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 FILIP1Q7Z7B0 1213 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 DDX53Q86TM3 631 aaKnown RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 VPS52Q8N1B4 723 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 C1orf127Q8N9H9 656 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 MICAL1Q8TDZ2 1067 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ANKRD36BP1Q96IX9 119 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CEP63Q96MT8 703 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ASB2Q96Q27 587 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 CGRRF1Q99675 332 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 MKNK1Q9BUB5 465 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 GPR62Q9BZJ7 368 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 AGAP1Q9UPQ3 857 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-202ENST00000422544 MYO15AQ9UKN7 3530 aa10.02□□□□□ -0.81
PDGFC-202ENST00000422544 ANO9A1A5B4 782 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TMEM189-UBE2V1I3L0A0 370 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 I3L4J1 428 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 PIRO00625 290 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 SPTLC1O15269 473 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 FGFR1OPO95684 399 aaKnown RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 EFEMP2O95967 443 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 CST3P01034 146 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TNNC2P02585 160 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 C4BPAP04003 597 aaKnown RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 ITGB3P05106 788 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 KRT19P08727 400 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TRIM49P0CI25 452 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TRIM49CP0CI26 452 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 IRS1P35568 1242 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 BRCC3P46736 316 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 RBP5P82980 135 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 UBE3AQ05086 875 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 BFSP1Q12934 665 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 PTPROQ16827 1216 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TPD52L1Q16890 204 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 ZSCAN23Q3MJ62 389 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 CCDC40Q4G0X9 1142 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 FAM171A1Q5VUB5 890 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 FUT10Q6P4F1 479 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 C11orf57Q6ZUT1 292 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TRAPPC11Q7Z392 1133 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TMC7Q7Z402 723 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 CREBRFQ8IUR6 639 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 CXorf38Q8TB03 319 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 B3GALT6Q96L58 329 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 DNAJC25Q9H1X3 360 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 MMRN2Q9H8L6 949 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 TLR9Q9NR96 1032 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 ARMCX3Q9UH62 379 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-202ENST00000422544 SIX4Q9UIU6 781 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 LZTS1Q9Y250 596 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 NUB1Q9Y5A7 615 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 PCDHGC5Q9Y5F6 944 aa10.01□□□□□ -0.81
PDGFC-202ENST00000422544 COL4A4P53420 1690 aaPredicted RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 DCHS1Q96JQ0 3298 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 IKBKBO14920 756 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 PHACTR2O75167 634 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 CXCL14O95715 111 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 SOD2P04179 222 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 CCDC192P0DO97 292 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 GCLMP48507 274 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 VASPP50552 380 aaPredicted RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 AP3M2P53677 418 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 LILRA4P59901 499 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 MCCD1P59942 119 aaPredicted RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 PPP3CAQ08209 521 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 BIRC3Q13489 604 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 ANO6Q4KMQ2 910 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms