RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SUSD3Q96L08 255 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 RIPOR3Q96MK2 946 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 KLRC4O43908 158 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 IL18RAPO95256 599 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 MYL1P05976 194 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 MTHFRP42898 656 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 LILRA6Q6PI73 481 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 BRSK2Q8IWQ3 736 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 ZSWIM2Q8NEG5 633 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 HDAC7Q8WUI4 952 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 SCFD1Q8WVM8 642 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 PLEKHA4Q9H4M7 779 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 EXOC1Q9NV70 894 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 BACE2Q9Y5Z0 518 aa28.64■■■□□ 2.18
CDK9-202ENST00000421939 KIAA0391O15091 583 aaKnown RBP28.63■■■□□ 2.17
CDK9-202ENST00000421939 ADAM12O43184 909 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 EXTL3O43909 919 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 WEE2P0C1S8 567 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 VARS2Q5ST30 1063 aaKnown RBP28.63■■■□□ 2.17
CDK9-202ENST00000421939 CMASQ8NFW8 434 aaPredicted RBP28.63■■■□□ 2.17
CDK9-202ENST00000421939 PCIF1Q9H4Z3 704 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 POMKQ9H5K3 350 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 SLC39A2Q9NP94 309 aa28.63■■■□□ 2.17
CDK9-202ENST00000421939 RBAKQ9NYW8 714 aaPredicted RBP28.63■■■□□ 2.17
CDK9-202ENST00000421939 GOLGA8IPA6NC78 632 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 GOLGA8JA6NMD2 632 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 SPATA31D3P0C874 917 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 BMT2Q1RMZ1 405 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 SPATA31D4Q6ZUB0 917 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 GPR149Q86SP6 731 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 NELFCDQ8IXH7 590 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 EFCAB13Q8IY85 973 aa28.62■■■□□ 2.17
CDK9-202ENST00000421939 LOC730098B7Z3J9 87 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 AARSP49588 968 aaKnown RBP eCLIP28.61■■■□□ 2.17
CDK9-202ENST00000421939 ATAT1Q5SQI0 421 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 KRBA2Q6ZNG9 492 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 C15orf39Q6ZRI6 1047 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 GPD1LQ8N335 351 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 KREMEN2Q8NCW0 462 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 FEZF2Q8TBJ5 459 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 NOC3LQ8WTT2 800 aaKnown RBP28.61■■■□□ 2.17
CDK9-202ENST00000421939 FBXW11Q9UKB1 542 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 CIZ1Q9ULV3 898 aaPredicted RBP28.61■■■□□ 2.17
CDK9-202ENST00000421939 PCDHB8Q9UN66 801 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 CDY1Q9Y6F8 540 aa28.61■■■□□ 2.17
CDK9-202ENST00000421939 PPEF2O14830 753 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 OR1D2P34982 312 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 WNT7BP56706 349 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 RAB33AQ14088 237 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 KMT5BQ4FZB7 885 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 C9orf57Q5W0N0 161 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 RSPO2Q6UXX9 243 aaPredicted RBP28.6■■■□□ 2.17
CDK9-202ENST00000421939 NT5DC4Q86YG4 428 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 APPL2Q8NEU8 664 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 RPGRIP1Q96KN7 1286 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 AGPAT3Q9NRZ7 376 aa28.6■■■□□ 2.17
CDK9-202ENST00000421939 MTCL1Q9Y4B5 1905 aaKnown RBP28.59■■■□□ 2.17
CDK9-202ENST00000421939 H7C4K7 107 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 TGFB1I1O43294 461 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 RFPL2O75678 378 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 ZNF202O95125 648 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 LIN9Q5TKA1 542 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 HS2ST1Q7LGA3 356 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 KHSRPQ92945 711 aaKnown RBP eCLIP28.59■■■□□ 2.17
CDK9-202ENST00000421939 ZDHHC7Q9NXF8 308 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 HSPBP1Q9NZL4 362 aa28.59■■■□□ 2.17
CDK9-202ENST00000421939 CCDC195A0A1B0GUA6 201 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 ANO9A1A5B4 782 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 GOLGA6L4A6NEF3 574 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 M0QZQ0 153 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 PRR29P0C7W0 189 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 SNRPFP62306 86 aaKnown RBP28.58■■■□□ 2.17
CDK9-202ENST00000421939 PSMD2Q13200 908 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 SLC8B1Q6J4K2 584 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 ZNF280DQ6N043 979 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 KIAA0895Q8NCT3 520 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 RHOBTB2Q9BYZ6 727 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 DPP3Q9NY33 737 aa28.58■■■□□ 2.17
CDK9-202ENST00000421939 DENND4AQ7Z401 1863 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 C2orf16Q68DN1 1984 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 TULP1O00294 542 aaPredicted RBP28.57■■■□□ 2.16
CDK9-202ENST00000421939 PIRO00625 290 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 TBC1D4O60343 1298 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 PAPLNO95428 1278 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 RPN1P04843 607 aaKnown RBP28.57■■■□□ 2.16
CDK9-202ENST00000421939 PAX3P23760 479 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 LILRA4P59901 499 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 TFAMQ00059 246 aaKnown RBP28.57■■■□□ 2.16
CDK9-202ENST00000421939 STK4Q13043 487 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 MRPL58Q14197 206 aaKnown RBP28.57■■■□□ 2.16
CDK9-202ENST00000421939 CYP26C1Q6V0L0 522 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 DSTYKQ6XUX3 929 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 TSHZ2Q9NRE2 1034 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 NR2E1Q9Y466 385 aa28.57■■■□□ 2.16
CDK9-202ENST00000421939 ZNF233A6NK53 670 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 ZMYND10O75800 440 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 SP100P23497 879 aaPredicted RBP28.56■■■□□ 2.16
CDK9-202ENST00000421939 KNOP1Q1ED39 458 aaKnown RBP28.56■■■□□ 2.16
CDK9-202ENST00000421939 CTXN3Q4LDR2 81 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 CBWD2Q8IUF1 395 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms